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Preprocessing

Installation

We use conda as an environment manager and poetry as dependency manager.

  1. Generate a conda env First, create and activate a basic conda env from the env_prep.yml file.

Run

    conda env create -f ./env/env_prep.yml

then

    conda activate env_prep

NB: it can be good to change the conda name env into env_basic_conda.yml file.

  1. Install poetry and package dependencies

To install package dependencies with poetry,

    poetry install

To update package dependencies,

    poetry update

Testing

For running all the tests:

    poetry run pytest 

For running a specific test:

    poetry run pytest path/my_test

See test coverage : [TO COMPLETE]

Preprocessing pipeline

Good pratices

PEP8

Use the pep8 norm to format all the code. Specific pep8 parameters are given into the pyproject.toml file.

autopep8 --in-place --aggressive --aggressive ./

FLAKE8

[TO COMPLETE]

Metadata

Release files for filtering-pipeline 0.2.2

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Source distribution for filtering-pipeline 0.2.2
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Table of built distributions (wheels) for filtering-pipeline 0.2.2
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filtering_pipeline-0.2.2-py2.py3-none-any.whl Python 2, Python 3 none any Details for filtering_pipeline-0.2.2-py2.py3-none-any.whl

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Security for filtering-pipeline 0.2.2

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