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Google Cloud Healthcare API client library

Project description

Google Cloud Healthcare API client library

A client library to interact with Google Cloud Healthcare API.

Quickstart

Install

git clone
pip install -e .

Optionally install the dicomweb_client package if you would like to use the integration with it.

Using the client

from healthcare_api.client import Client
c = Client() # will use your default gcloud credentials, use the token parameter to override it

# list available locations
locations = c.locations.list(name='projects/YOUR_PROJECT_ID') # TODO: change YOUR_PROJECT_ID
# NOTE: locations is a generator
for location in locations:
    print(location)

See the table below for the available methods. Check the official Healthcare API documentation for the parameters of the methods.

https://cloud.google.com/healthcare/docs/reference/rest/

NOTE: Annotations API only available in v1alpha2

Examples

Testing

pipenv install --dev
pipenv run pip install --no-deps dicomweb_client
# set GCLOUD_AUTH_TOKEN env var with your auth token
# or set application default credential using gcloud
# gcloud auth application-default login
pipenv run tests/bin/tests.sh

Method matrix

HC Api version HC Method Equivalent client method
v1beta1 projects.locations.get locations.get
v1beta1 projects.locations.list locations.list
v1beta1 projects.locations.datasets.create datasets.create
v1beta1 projects.locations.datasets.deidentify datasets.deidentify
v1beta1 projects.locations.datasets.delete datasets.delete
v1beta1 projects.locations.datasets.get datasets.get
v1beta1 projects.locations.datasets.getIamPolicy datasets.getIamPolicy
v1beta1 projects.locations.datasets.list datasets.list
v1beta1 projects.locations.datasets.patch datasets.patch
v1beta1 projects.locations.datasets.setIamPolicy datasets.setIamPolicy
v1beta1 projects.locations.datasets.testIamPermissions datasets.testIamPermissions
v1alpha2 projects.locations.datasets.annotationStores.create annotationStores.create
v1alpha2 projects.locations.datasets.annotationStores.delete annotationStores.delete
v1alpha2 projects.locations.datasets.annotationStores.get annotationStores.get
v1alpha2 projects.locations.datasets.annotationStores.getIamPolicy annotationStores.getIamPolicy
v1alpha2 projects.locations.datasets.annotationStores.list annotationStores.list
v1alpha2 projects.locations.datasets.annotationStores.patch annotationStores.patch
v1alpha2 projects.locations.datasets.annotationStores.setIamPolicy annotationStores.setIamPolicy
v1alpha2 projects.locations.datasets.annotationStores.testIamPermissions annotationStores.testIamPermissions
v1alpha2 projects.locations.datasets.annotationStores.annotations.create annotations.create
v1alpha2 projects.locations.datasets.annotationStores.annotations.delete annotations.delete
v1alpha2 projects.locations.datasets.annotationStores.annotations.list annotations.list
v1alpha2 projects.locations.datasets.annotationStores.annotations.patch annotations.patch
v1beta1 projects.locations.datasets.dicomStores.create dicomStores.create
v1beta1 projects.locations.datasets.dicomStores.delete dicomStores.delete
v1beta1 projects.locations.datasets.dicomStores.export dicomStores.export
v1beta1 projects.locations.datasets.dicomStores.get dicomStores.get
v1beta1 projects.locations.datasets.dicomStores.getIamPolicy dicomStores.getIamPolicy
v1beta1 projects.locations.datasets.dicomStores.import dicomStores.import
v1beta1 projects.locations.datasets.dicomStores.list dicomStores.list
v1beta1 projects.locations.datasets.dicomStores.patch dicomStores.patch
v1beta1 projects.locations.datasets.dicomStores.searchForInstances dicomStores.dicomWeb.search_for_instances
v1beta1 projects.locations.datasets.dicomStores.searchForSeries dicomStores.dicomWeb.search_for_series
v1beta1 projects.locations.datasets.dicomStores.searchForStudies dicomStores.dicomWeb.search_for_studies
v1beta1 projects.locations.datasets.dicomStores.setIamPolicy dicomStores.setIamPolicy
v1beta1 projects.locations.datasets.dicomStores.storeInstances dicomStores.dicomWeb.store_instances
v1beta1 projects.locations.datasets.dicomStores.testIamPermissions dicomStores.testIamPermissions
v1beta1 projects.locations.datasets.dicomStores.studies.delete dicomStores.studies.delete
v1beta1 projects.locations.datasets.dicomStores.studies.retrieveMetadata dicomStores.dicomWeb.retrieve_study_metadata
v1beta1 projects.locations.datasets.dicomStores.studies.retrieveStudy dicomStores.dicomWeb.retrieve_study
v1beta1 projects.locations.datasets.dicomStores.studies.searchForInstances dicomStores.dicomWeb.search_for_instances
v1beta1 projects.locations.datasets.dicomStores.studies.searchForSeries dicomStores.dicomWeb.search_for_series
v1beta1 projects.locations.datasets.dicomStores.studies.storeInstances dicomStores.dicomWeb.store_instances
v1beta1 projects.locations.datasets.dicomStores.studies.series.delete dicomStores.studies.series.delete
v1beta1 projects.locations.datasets.dicomStores.studies.series.retrieveMetadata dicomStores.dicomWeb.retrieve_series_metadata
v1beta1 projects.locations.datasets.dicomStores.studies.series.retrieveSeries dicomStores.dicomWeb.retrieve_series
v1beta1 projects.locations.datasets.dicomStores.studies.series.searchForInstances dicomStores.dicomWeb.search_for_instances
v1beta1 projects.locations.datasets.dicomStores.studies.series.instances.delete dicomStores.studies.series.instances.delete
v1beta1 projects.locations.datasets.dicomStores.studies.series.instances.retrieveInstance dicomStores.dicomWeb.retrieve_instance
v1beta1 projects.locations.datasets.dicomStores.studies.series.instances.retrieveMetadata dicomStores.dicomWeb.retrieve_instance_metadata
v1beta1 projects.locations.datasets.dicomStores.studies.series.instances.retrieveRendered dicomStores.dicomWeb.retrieve_instance_rendered
v1beta1 projects.locations.datasets.dicomStores.studies.series.instances.frames.retrieveFrames dicomStores.dicomWeb.retrieve_instance_frames
v1beta1 projects.locations.datasets.dicomStores.studies.series.instances.frames.retrieveRendered dicomStores.dicomWeb.retrieve_instance_frames_rendered
v1beta1 projects.locations.datasets.fhirStores.create fhirStores.create
v1beta1 projects.locations.datasets.fhirStores.delete fhirStores.delete
v1beta1 projects.locations.datasets.fhirStores.export fhirStores.export
v1beta1 projects.locations.datasets.fhirStores.get fhirStores.get
v1beta1 projects.locations.datasets.fhirStores.getIamPolicy fhirStores.getIamPolicy
v1beta1 projects.locations.datasets.fhirStores.import fhirStores.import
v1beta1 projects.locations.datasets.fhirStores.list fhirStores.list
v1beta1 projects.locations.datasets.fhirStores.patch fhirStores.patch
v1beta1 projects.locations.datasets.fhirStores.setIamPolicy fhirStores.setIamPolicy
v1beta1 projects.locations.datasets.fhirStores.testIamPermissions fhirStores.testIamPermissions
v1beta1 projects.locations.datasets.fhirStores.fhir.Observation-lastn fhirStores.fhir.observationLastn
v1beta1 projects.locations.datasets.fhirStores.fhir.Patient-everything fhirStores.fhir.patientEverything
v1beta1 projects.locations.datasets.fhirStores.fhir.Resource-purge fhirStores.fhir.resourcePurge
v1beta1 projects.locations.datasets.fhirStores.fhir.capabilities fhirStores.fhir.capabilities
v1beta1 projects.locations.datasets.fhirStores.fhir.conditionalDelete fhirStores.fhir.conditionalDelete
v1beta1 projects.locations.datasets.fhirStores.fhir.conditionalPatch fhirStores.fhir.conditionalPatch
v1beta1 projects.locations.datasets.fhirStores.fhir.conditionalUpdate fhirStores.fhir.conditionalUpdate
v1beta1 projects.locations.datasets.fhirStores.fhir.create fhirStores.fhir.create
v1beta1 projects.locations.datasets.fhirStores.fhir.delete fhirStores.fhir.delete
v1beta1 projects.locations.datasets.fhirStores.fhir.executeBundle fhirStores.fhir.executeBundle
v1beta1 projects.locations.datasets.fhirStores.fhir.history fhirStores.fhir.history
v1beta1 projects.locations.datasets.fhirStores.fhir.patch fhirStores.fhir.patch
v1beta1 projects.locations.datasets.fhirStores.fhir.read fhirStores.fhir.read
v1beta1 projects.locations.datasets.fhirStores.fhir.search fhirStores.fhir.search
v1beta1 projects.locations.datasets.fhirStores.fhir.update fhirStores.fhir.update
v1beta1 projects.locations.datasets.fhirStores.fhir.vread fhirStores.fhir.vread
v1beta1 projects.locations.datasets.hl7V2Stores.create hl7V2Stores.create
v1beta1 projects.locations.datasets.hl7V2Stores.delete hl7V2Stores.delete
v1beta1 projects.locations.datasets.hl7V2Stores.get hl7V2Stores.get
v1beta1 projects.locations.datasets.hl7V2Stores.getIamPolicy hl7V2Stores.getIamPolicy
v1beta1 projects.locations.datasets.hl7V2Stores.list hl7V2Stores.list
v1beta1 projects.locations.datasets.hl7V2Stores.patch hl7V2Stores.patch
v1beta1 projects.locations.datasets.hl7V2Stores.setIamPolicy hl7V2Stores.setIamPolicy
v1beta1 projects.locations.datasets.hl7V2Stores.testIamPermissions hl7V2Stores.testIamPermissions
v1beta1 projects.locations.datasets.hl7V2Stores.messages.create hl7V2Stores.messages.create
v1beta1 projects.locations.datasets.hl7V2Stores.messages.delete hl7V2Stores.messages.delete
v1beta1 projects.locations.datasets.hl7V2Stores.messages.get hl7V2Stores.messages.get
v1beta1 projects.locations.datasets.hl7V2Stores.messages.ingest hl7V2Stores.messages.ingest
v1beta1 projects.locations.datasets.hl7V2Stores.messages.list hl7V2Stores.messages.list
v1beta1 projects.locations.datasets.hl7V2Stores.messages.patch hl7V2Stores.messages.patch
v1beta1 projects.locations.datasets.operations.get operations.get
v1beta1 projects.locations.datasets.operations.list operations.list

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