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A set of tools that facilitates genome to genome conversion for studying multiparent populations

Project Description

https://badge.fury.io/py/g2gtools.png https://travis-ci.org/churchill-lab/g2gtools.png?branch=master Documentation Status

g2gtools creates custom genomes by incorporating (phased) SNPs and indels into reference genome, extracts regions of interest, e.g., exons or transcripts, from custom genomes, and converts coordinates of files (bam, gtf, bed) between two genomes.

Reference

Manuscript in preparation (expected in 2017)

History

0.1.29 (05/17/2016)

  • Fixed parsing issue with GATK-generated VCF files

0.1.27 (05/04/2016)

  • Uploaded the package to Anaconda Cloud
  • Fixed Travis CI fail

0.1.23 (02/15/2016)

  • Setup Travis CI for automated building

0.1.22 (02/15/2016)

  • Updated documentation

0.1.20 (02/03/2016)

  • Released to public with documentation at g2gtools.readthedocs.org

0.1.0 (02/09/2015)

  • Started github repository

Release history Release notifications

This version
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0.1.31

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0.1.29

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0.1.27

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0.1.26

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0.1.25

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0.1.24

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0.1.22

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0.1.20

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v0.1.19

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0.1.15

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0.1.13

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0.1.2

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0.1.1

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Filename, size & hash SHA256 hash help File type Python version Upload date
g2gtools-0.1.31.tar.gz (76.3 kB) Copy SHA256 hash SHA256 Source None Feb 17, 2017

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