galaxy-files 26.1.0

Add request_checksum_calculation support for s3fs by @lldelisle in #21993

Fix broken log format string in validate_non_local by @jmchilton in #22004

Restore WebDAV template v0; add v1 for url -> base_url rename by @mvdbeek in #22570

Default S3 request checksum to when_required for non-AWS endpoints by @mvdbeek in #23034

Stop the ssh file source from using local keys or the SSH agent by @bernt-matthias in #23066

Use requests rather than urllib for Invenio authenticated downloads by @martenson in #23096

Support multipart upload for Invenio-based file sources by @martenson in #23118

Always use context managers in py2filesystem file sources by @bernt-matthias in #21645

Improvements for ssh file sources by @bernt-matthias in #21646

Add support for file hash in Dataverse datasets by @davelopez in #21890

Migrate Python packages to `src` layout and pure namespace packages by @mr-c in #21977

Update Python dependencies by @galaxybot in #22003

Update Python dependencies by @galaxybot in #22206

Unify path adaptation for remote file sources by @davelopez in #22336

Add OneDrive file source by @PlushZ in #22367

Add IIIF File Source Support by @davelopez in #22420

Migrate WebDAV file source to fsspec/webdav4 by @PlushZ in #22477

Allow attaching OIDC access token to DRS requests by @marius-mather in #22484

Migrate Dropbox file source to fsspec by @PlushZ in #22682

Add support for file checksums in Zenodo/Invenio by @davelopez in #22691

Migrate the Google Drive file source to fsspec by @PlushZ in #22696

Backport of iRODS file source by @davelopez in #22816

Various fixes around ascp file source by @mvdbeek in #21372

Better error message for unencoded/unresolvable filesource uri by @dannon in #21562

Fix OMERO file source download multi channel TIFF by @davelopez in #21856

Fix ascp download retries by @mvdbeek in #21857

Fixes some more optional fields in templates by @davelopez in #21891

Fix Pydantic UnsupportedFieldAttributeWarning for Field defaults in Annotated by @mvdbeek in #21923

Fix OMERO temp directory handling by @davelopez in #22262

Harden API parameter validation by @mvdbeek in #22351

Add DRS compact identifier support by @dannon in #20410

Add service account support for Google Cloud Storage client initialization by @dannon in #21027

Update Python dependencies by @galaxybot in #21043

Add Custom Validation for User-Configured Templates by @davelopez in #21155

Ascp plugin by @d-callan in #21357

Add OMERO File Source Plugin by @davelopez in #21367

Add new Azure Flat object store file source by @guerler in #21398

Add AI Agent Framework and ChatGXY 2.0 by @dannon in #21434

Clean up code with pyupgrade by @nsoranzo in #21540

Drop support for Python 3.9 by @nsoranzo in #21583

Switch Google Cloud Storage file source from fs-gcsfs to gcsfs (fsspec) by @mvdbeek in #21590

Unify extensions of file source templates by @bernt-matthias in #21594

Various fixes to file source template’s validation system by @davelopez in #21704

Adds ImageJ metadata support to TIFF export by @davelopez in #21882

Use mock test server when tests don’t target external galaxy server by @mvdbeek in #22103

Change wording of the client side storage handling by @bgruening in #19815

Fix GCS file source to handle virtual directories without marker objects by @dannon in #21051

Fix Huggingface timestamp parsing when last_commit is missing by @davelopez in #21072

Fixes download for restricted Zenodo records by @davelopez in #21274

Type annotation fixes for mypy 1.16.0 by @nsoranzo in #20424

Add Dataverse template by @davelopez in #20551

Clean up code from pyupgrade by @nsoranzo in #20642

Add fsspec base implementation for File Source plugins by @davelopez in #20698

Refactor Files Sources Framework for stronger typing using pydantic models by @davelopez in #20728

Adapt S3 file source to fsspec by @davelopez in #20794

Fix fsspec fs path handling by @davelopez in #20799

Add Hugging Face 🤗 file source and user-defined template by @davelopez in #20805

Support remote file source hashes by @davelopez in #20853

Use resource_path() to access datatypes_conf.xml.sample as a package resource by @nsoranzo in #19331

Fix wrong URI written to ExportObjectResultMetadata when exporting histories to eLabFTW by @kysrpex in #19541

Update webdav user file source template help text by @sanjaysrikakulam in #19784

Change wording in the google drive user file source template by @sanjaysrikakulam in #19927

Let file sources choose a path for uploaded files by @kysrpex in #19154

eLabFTW integration via Galaxy file source by @kysrpex in #19319

Add Dataverse RDM repository integration by @KaiOnGitHub in #19367

Type annotation fixes for mypy 1.14.0 by @nsoranzo in #19372

Handles S3 listing errors by @itisAliRH in #19446

Add eLabFTW file source from file source templates by @kysrpex in #19493

Add InvenioRDM file source template by @davelopez in #19619

Use discriminated unions in object stores and file source template configs by @davelopez in #19621

Add Zenodo file source template by @davelopez in #19638

Drop support for Python 3.8 by @nsoranzo in #19685

Enable warn_redundant_casts mypy option and drop redundant casts by @nsoranzo in #20008

Add ZIP explorer to import individual files from local or remote ZIP archives by @davelopez in #20054

Implement file source to integrate Galaxy with RSpace by @kysrpex in #20167

Fix file source search query with empty string value by @davelopez in #18191

Small bug fixes for user data plugins by @jmchilton in #18246

Fix check for anonymous by @jdavcs in #18364

Add onedata objectstore by @bwalkowi in #17540

Update Python dependencies by @galaxybot in #17653

Code cleanups from ruff and pyupgrade by @nsoranzo in #17654

Enable warn_unused_ignores mypy option by @nsoranzo in #17991

Add galaxy to user agent by @mvdbeek in #18003

Add Zenodo integration by @davelopez in #18022

More typing in galaxy.files. by @jmchilton in #18037

Refactor galaxy.files plugin loading + config handling. by @jmchilton in #18049

Add stronger type annotations in file sources + refactoring by @davelopez in #18050

Add pagination support to Files Source plugins by @davelopez in #18059

Update Python dependencies by @galaxybot in #18063

Overhaul Azure storage infrastructure. by @jmchilton in #18087

Empower users to bring their own storage and file sources by @jmchilton in #18127

Display DOIs in Archived Histories by @davelopez in #18134

Update s3fs dependency. by @jmchilton in #18135

Onedada object store and files source stability fixes by @bwalkowi in #18372

Fix #18316 (anonymous file sources) by @jmchilton in #18352

Invenio plugin fixes by @davelopez in #17997

Fix remote files sources error handling by @davelopez in #18027

pin fs.dropboxfs to >=1 by @bernt-matthias in #16451

Write to a temp filename in posix file source plugin by @natefoo in #17350

Set webdav file source to use temp files by default by @davelopez in #17388

More defensive access of extra props in filesources by @nuwang in #17445

Add Invenio RDM repository integration by @davelopez in #16381

Refactor FilesDialog + Remote Files API schema improvements by @davelopez in #16420

Use fs.onedatarestfs for Onedata files source plugin implementation by @lopiola in #16690

Remove record access handling for Invenio RDM plugin by @davelopez in #16900

Enhance Invenio RDM integration by @davelopez in #16964

Fix some drs handling issues by @nuwang in #15777

Fix filesource file url support by @nuwang in #15794

Fix unittest mocks to support us checking geturl() by @dannon in #16726

Fix allowlist deserialization in file sources by @mvdbeek in #16729

Unify url handling with filesources by @nuwang in #15497