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Marius van den Beek

Username    mvdbeek
Date joined   Joined

44 projects

pulsar-relay

Last released

High-performance message relay system for real-time message delivery via WebSocket and long-polling

pulsar-relay-client

Last released

Client library for the pulsar-relay HTTP wire contract (auth, transport, device flow, topic management)

gravity

Last released

Command-line utilities to assist in managing Galaxy servers

bioblend

Last released

Library for interacting with the Galaxy API

pydantic-tes

Last released

Pydantic Models for the GA4GH Task Execution Service

schema-salad-plus-pydantic

Last released

Generate pydantic v2 BaseModel classes from schema-salad definitions

galaxy-web-stack

Last released

Galaxy web stack abstraction

galaxy-web-framework

Last released

Galaxy web framework

galaxy-web-apps

Last released

Galaxy web apps

galaxy-util

Last released

Galaxy generic utilities

galaxy-tool-util

Last released

Galaxy tool and tool dependency utilities

galaxy-test-driver

Last released

Galaxy test driver

galaxy-test-base

Last released

Galaxy testing utilities

galaxy-test-api

Last released

Galaxy API tests

galaxy-selenium

Last released

Galaxy Selenium interaction framework

galaxy-objectstore

Last released

Galaxy objectstore framework and plugins

galaxy-job-metrics

Last released

Galaxy job metrics

galaxy-job-execution

Last released

Galaxy job execution runtime utilities

galaxy-files

Last released

Galaxy file source framework and default plugins

galaxy-data

Last released

Galaxy datatype framework and datatypes

galaxy-config

Last released

Galaxy configuration

galaxy-auth

Last released

Galaxy auth framework and implementations

galaxy-app

Last released

Galaxy application (backend)

galaxy

Last released

Galaxy server metapackage

planemo

Last released

Command-line utilities to assist in building tools for the Galaxy project (http://galaxyproject.org/).

galaxy-job-config-init

Last released

Galaxy configuration

galaxy-release-util

Last released

Utlity for various tasks around creating Galaxy releases

pulsar-galaxy-lib

Last released

Distributed job execution application built for Galaxy (http://galaxyproject.org/).

pulsar-app

Last released

Distributed job execution application built for Galaxy (http://galaxyproject.org/).

edam-ontology

Last released

Versioned, Python packaged EDAM ontology (http://edamontology.org/) data.

ephemeris

Last released

Ephemeris is an opinionated library and set of scripts for managing the bootstrapping of Galaxy project plugins - tools, index data, and workflows.

tuswsgi

Last released

python wsgi filter for tus protocol 1.0.0

galaxy-test-selenium

Last released

Galaxy Selenium Tests

mock-ssh-server

Last released

Mock SSH server for testing purposes

workflow2executable

Last released

Turn Galaxy Workflows into standalone scripts.

readtagger

Last released

Tags reads in a BAM file based on other BAM files.

compare-reads

Last released

cythonized function to compare reads by name

dedup_hash

Last released

Finds and discards exact duplicate reads in fastq files.

ifbcloud

Last released

Commandline utility to start and stop instances on the french IFB cloud

5 archived projects

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