44 projects
gravity
Command-line utilities to assist in managing Galaxy servers
planemo
Command-line utilities to assist in building tools for the Galaxy project (http://galaxyproject.org/).
galaxy-web-stack
Galaxy web stack abstraction
galaxy-web-framework
Galaxy web framework
galaxy-web-apps
Galaxy web apps
galaxy-util
Galaxy generic utilities
galaxy-tool-util
Galaxy tool and tool dependency utilities
galaxy-test-selenium
Galaxy Selenium tests
galaxy-test-driver
Galaxy test driver
galaxy-test-base
Galaxy testing utilities
galaxy-test-api
Galaxy API tests
galaxy-selenium
Galaxy Selenium interaction framework
galaxy-objectstore
Galaxy objectstore framework and plugins
galaxy-job-metrics
Galaxy job metrics
galaxy-job-execution
Galaxy job execution runtime utilities
galaxy-files
Galaxy file source framework and default plugins
galaxy-data
Galaxy datatype framework and datatypes
galaxy-config
Galaxy configuration
galaxy-auth
Galaxy auth framework and implementations
galaxy-app
Galaxy application (backend)
galaxy
Galaxy server metapackage
galaxy-release-util
Utlity for various tasks around creating Galaxy releases
pulsar-galaxy-lib
Distributed job execution application built for Galaxy (http://galaxyproject.org/).
pulsar-app
Distributed job execution application built for Galaxy (http://galaxyproject.org/).
schema-salad-plus-pydantic
Generate pydantic v2 BaseModel classes from schema-salad definitions
pulsar-relay
High-performance message relay system for real-time message delivery via WebSocket and long-polling
pulsar-relay-client
Client library for the pulsar-relay HTTP wire contract (auth, transport, device flow, topic management)
bioblend
Library for interacting with the Galaxy API
pydantic-tes
Pydantic Models for the GA4GH Task Execution Service
galaxy-job-config-init
Galaxy configuration
edam-ontology
Versioned, Python packaged EDAM ontology (http://edamontology.org/) data.
ephemeris
Ephemeris is an opinionated library and set of scripts for managing the bootstrapping of Galaxy project plugins - tools, index data, and workflows.
tuswsgi
python wsgi filter for tus protocol 1.0.0
mock-ssh-server
Mock SSH server for testing purposes
workflow2executable
Turn Galaxy Workflows into standalone scripts.
readtagger
Tags reads in a BAM file based on other BAM files.
compare-reads
cythonized function to compare reads by name
dedup_hash
Finds and discards exact duplicate reads in fastq files.
ifbcloud
Commandline utility to start and stop instances on the french IFB cloud
5 archived projects
galaxy-containers Archived
Galaxy Container Modeling and Interaction Abstractions
galaxy-test-tools Archived
Galaxy Test Tools`
galaxy-authnz Archived
Galaxy AuthNZ
galaxy-model-tools Archived
Galaxy Model Tools`
galaxy-lib Archived
Subset of Galaxy (http://galaxyproject.org/) core code base designed to be used a library.
