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Galaxy server metapackage

Project description

Galaxy Logo

The latest information about Galaxy can be found on the Galaxy Community Hub.

Community support is available at Galaxy Help.

Chat on gitter Chat on irc Release Documentation Inspect the test results

Galaxy Quickstart

Galaxy requires Python 3.9 or higher. To check your Python version, run:

$ python -V
Python 3.9.21

Start Galaxy:

$ sh run.sh

Once Galaxy completes startup, you should be able to view Galaxy in your browser at: http://localhost:8080

For more installation details please see: https://getgalaxy.org/

Documentation is available at: https://docs.galaxyproject.org/

Tutorials on how to use Galaxy, perform scientific analyses with it, develop Galaxy and its tools, and admin a Galaxy server are at: https://training.galaxyproject.org/

Tools

Tools can be either installed from the Tool Shed or added manually. For details please see the tutorial. Note that not all dependencies for the tools provided in the tool_conf.xml.sample are included. To install them please visit “Manage dependencies” in the admin interface.

Issues and Galaxy Development

Please see CONTRIBUTING.md .

History

25.0.1 (2025-06-20)

Bug fixes
  • Fix single data element identifier to be a regular string by @mvdbeek in #20438

  • Relax validation of XML test assertion parsing by @mvdbeek in #20511

  • Add id-token: write for npm publishing by @mvdbeek in #20519

  • Do not expose user info to non authenticated users by @bernt-matthias in #20524

  • names of package extras cannot contain underscores by @mr-c in #20525

  • Pin isa-rwval 0.10.11, drop conditional import handling by @natefoo in #20527

  • Fix import of galaxy.tool_util.cwl module by @nsoranzo in #20529

  • Fix galaxy-config script, move install to galaxy-dependencies in app package by @natefoo in #20531

Enhancements
Other changes

25.0.0 (2025-06-18)

Bug fixes
Enhancements
Other changes

24.2.4 (2025-06-17)

Bug fixes
Enhancements
  • Bump up max_peek_size to 50MB by @mvdbeek in #19823

  • Point install_requires at requirements.txt file by @mvdbeek in #19864

  • Fix Invenio file source downloads not working with some Invenio instances by @davelopez in #19930

  • Update selectable object stores after adding or editing them by @davelopez in #19992

Other changes

19.9.0 (2019-11-21)

  • Initial import from dev branch of Galaxy during 19.09 development cycle.

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