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Galaxy job execution runtime utilities

Project description

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Overview

The Galaxy job execution runtime module.

History

25.0.1 (2025-06-20)

No recorded changes since last release

25.0.0 (2025-06-18)

Bug fixes

Enhancements

24.2.4 (2025-06-17)

Bug fixes

  • Don’t collect unnamed outputs twice in extended metadata mode by @mvdbeek in #19868

24.2.3 (2025-03-16)

Bug fixes

  • Use materialized datasets in pulsar job runner by @mvdbeek in #19807

24.2.2 (2025-03-08)

No recorded changes since last release

24.2.1 (2025-02-28)

No recorded changes since last release

24.2.0 (2025-02-11)

Bug fixes

24.1.4 (2024-12-11)

Bug fixes

  • Add input extra files to get_input_fnames by @mvdbeek in #18462

  • Retry container monitor POST if it fails (don’t assume it succeeded) by @natefoo in #18863

24.1.3 (2024-10-25)

Bug fixes

  • Add input extra files to get_input_fnames by @mvdbeek in #18462

  • Retry container monitor POST if it fails (don’t assume it succeeded) by @natefoo in #18863

24.1.2 (2024-09-25)

Bug fixes

  • Retry container monitor POST if it fails (don’t assume it succeeded) by @natefoo in #18863

24.1.1 (2024-07-02)

Bug fixes

Enhancements

24.0.3 (2024-06-28)

Bug fixes

  • Include traceback when logging email PJA exception by @mvdbeek in #18122

  • Don’t commit in DeleteIntermediatesAction by @mvdbeek in #18131

  • Don’t fail metadata if we only have an extra output files dir by @mvdbeek in #18179

  • Don’t set dataset peek for errored jobs by @mvdbeek in #18231

  • Do not copy purged outputs to object store by @mvdbeek in #18342

24.0.2 (2024-05-07)

No recorded changes since last release

24.0.1 (2024-05-02)

No recorded changes since last release

24.0.0 (2024-04-02)

Bug fixes

Enhancements

23.2.1 (2024-02-21)

Enhancements

23.1.4 (2024-01-04)

No recorded changes since last release

23.1.3 (2023-12-01)

No recorded changes since last release

23.1.2 (2023-11-29)

Bug fixes

  • Fix library import from path linking files by @davelopez in #16919

  • Don’t store job in JobIO instance attributes by @mvdbeek in #16965

  • Fix extra files collection if using store_by="id" and outputs_to_working_directory by @mvdbeek in #17067

23.1.1 (2023-10-23)

Bug fixes

Enhancements

  • Empower Users to Select Storage Destination by @jmchilton in #14073

  • Towards SQLAlchemy 2.0: drop session autocommit setting by @jdavcs in #15421

  • Unify url handling with filesources by @nuwang in #15497

  • Handle “email_from” config option consistently, as per schema description by @jdavcs in #15557

  • Record input datasets and collections at full parameter path by @mvdbeek in #15978

  • Code cleanups from ruff and pyupgrade by @nsoranzo in #16035

  • Improved Cache Monitoring for Object Stores by @jmchilton in #16110

  • Remove various fallback behaviors by @mvdbeek in #16199

23.0.6 (2023-10-23)

Bug fixes

  • Fix extra files path handling by @mvdbeek in #16541

  • Make sure job_wrapper uses a consistent metadata strategy by @mvdbeek in #16569

  • Fixes for extra files handling and cached object stores by @mvdbeek in #16595

23.0.5 (2023-07-29)

No recorded changes since last release

23.0.4 (2023-06-30)

No recorded changes since last release

23.0.3 (2023-06-26)

No recorded changes since last release

23.0.2 (2023-06-13)

No recorded changes since last release

23.0.1 (2023-06-08)

No recorded changes since last release

20.9.0 (2020-10-15)

  • First release from the 20.09 branch of Galaxy.

20.5.0 (2020-07-04)

  • First release from the 20.05 branch of Galaxy.

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