galaxy-objectstore 26.0.1.dev0

Galaxy objectstore framework and plugins

Overview

The Galaxy object store framework and default implementations.

• Code: https://github.com/galaxyproject/galaxy

History

26.0.1.dev0

26.0.0 (2026-04-08)

Bug fixes

• Fix refresh time in object store caches by @bgruening in #22279

• Fix atomicity issues when pulling files into object store cache by @mvdbeek in #22304

• Harden API parameter validation by @mvdbeek in #22351

Enhancements

• Add Playwright Backend Support to Galaxy Browser Automation Framework by @jmchilton in #21102

• Apply 2026 black style by @galaxybot in #21618

• Various fixes to file source template’s validation system by @davelopez in #21704

25.1.2 (2026-03-09)

No recorded changes since last release

25.1.1 (2026-02-03)

No recorded changes since last release

25.1.0 (2025-12-12)

Bug fixes

• Change wording of the client side storage handling by @bgruening in #19815

Enhancements

• Add short term storage expiration indicator to history items by @davelopez in #20332

• Type annotation fixes for mypy 1.16.0 by @nsoranzo in #20424

• Clean up code from pyupgrade by @nsoranzo in #20642

25.0.4 (2025-11-18)

No recorded changes since last release

25.0.3 (2025-09-23)

No recorded changes since last release

25.0.2 (2025-08-13)

Bug fixes

• Do not set attribute on a namedtuple by @jdavcs in #20599

25.0.1 (2025-06-20)

No recorded changes since last release

25.0.0 (2025-06-18)

Bug fixes

• Use resource_path() to access datatypes_conf.xml.sample as a package resource by @nsoranzo in #19331

• Create rucio.cfg from inside Rucio objectstore by @SergeyYakubov in #19863

• Fix broken optimisation introduced in #19852 by @nsoranzo in #19871

Enhancements

• Irods objectstore templates by @pauldg in #19415

• Use discriminated unions in object stores and file source template configs by @davelopez in #19621

• Format code with black 25.1.0 by @nsoranzo in #19625

• Rucio templates by @SergeyYakubov in #19720

24.2.4 (2025-06-17)

Bug fixes

• Handle special charater in raw SQL by @jdavcs in #19925

24.2.3 (2025-03-16)

No recorded changes since last release

24.2.2 (2025-03-08)

No recorded changes since last release

24.2.1 (2025-02-28)

No recorded changes since last release

24.2.0 (2025-02-11)

Bug fixes

• Fixes for errors reported by mypy 1.11.0 by @nsoranzo in #18608

• Fix job directory not being cleaned up by @davelopez in #18997

• Fix quota usage with user object stores by @davelopez in #19323

• Fix object not found handling by @mvdbeek in #19468

Enhancements

• Allow OAuth 2.0 user defined file sources (w/Dropbox integration) by @jmchilton in #18272

• Add onedata templates by @bwalkowi in #18457

• Add missing version in the file sources and object store templates by @sanjaysrikakulam in #18497

• Add a retry when deleting a k8s job by @afgane in #18744

• Irods ssl connection by @pauldg in #19014

24.1.4 (2024-12-11)

Bug fixes

• Fix shared caches with extended metadata collection. by @jmchilton in #18520

24.1.3 (2024-10-25)

Bug fixes

• Fix shared caches with extended metadata collection. by @jmchilton in #18520

24.1.2 (2024-09-25)

Bug fixes

• Fix shared caches with extended metadata collection. by @jmchilton in #18520

24.1.1 (2024-07-02)

Bug fixes

• Fix odd object store exception by @jmchilton in #17810

• Fix AWS object store for us-east-2 by @jmchilton in #18100

• Fairly critical fix for #18087 by @jmchilton in #18110

Enhancements

• Adding object store plugin for Rucio by @SergeyYakubov in #17156

• Add onedata objectstore by @bwalkowi in #17540

• Update Python dependencies by @galaxybot in #17653

• Code cleanups from ruff and pyupgrade by @nsoranzo in #17654

• Enable warn_unused_ignores mypy option by @nsoranzo in #17991

• Update Python dependencies by @galaxybot in #18063

• Enable flake8-implicit-str-concat ruff rules by @nsoranzo in #18067

• Overhaul Azure storage infrastructure. by @jmchilton in #18087

• Empower users to bring their own storage and file sources by @jmchilton in #18127

• More unit testing for object store stuff. by @jmchilton in #18136

• Harden User Object Store and File Source Creation by @jmchilton in #18172

• De-duplication of onedata objectstore code. by @jmchilton in #18174

• More structured indexing for user data objects. by @jmchilton in #18291

• Onedada object store and files source stability fixes by @bwalkowi in #18372

24.0.3 (2024-06-28)

Bug fixes

• Include stack when reporting delete error by @mvdbeek in #18208

• Only log error if deleting directory really failed by @mvdbeek in #18236

• Do not copy purged outputs to object store by @mvdbeek in #18342

24.0.2 (2024-05-07)

No recorded changes since last release

24.0.1 (2024-05-02)

No recorded changes since last release

24.0.0 (2024-04-02)

Enhancements

• Convert sample object store configuration to YAML and support configuring inline by @natefoo in #17222

• Migrate models to pydantic 2 by @mvdbeek in #17262

• API endpoint that allows “changing” the objectstore for “safe” scenarios. by @jmchilton in #17329

• Update to black 2024 stable style by @nsoranzo in #17391

• Allow filtering history datasets by object store ID and quota source. by @jmchilton in #17460

• Improved error messages for runtime sharing problems. by @jmchilton in #17794

23.2.1 (2024-02-21)

Enhancements

• Move and re-use persist_extra_files by @mvdbeek in #16955

• optimize object store cache operations by @SergeyYakubov in #17025

Other changes

• Merge 23.1 into dev by @mvdbeek in #16534

23.1.4 (2024-01-04)

No recorded changes since last release

23.1.3 (2023-12-01)

No recorded changes since last release

23.1.2 (2023-11-29)

No recorded changes since last release

23.1.1 (2023-10-23)

Bug fixes

• Enable strict_equality mypy option by @nsoranzo in #15808

Enhancements

• Empower Users to Select Storage Destination by @jmchilton in #14073

• Update Python dependencies by @galaxybot in #15435

• Refactor badge parsing/serialization/typing for reuse. by @jmchilton in #15987

• Rename object stores in config. by @jmchilton in #16029

• Code cleanups from ruff and pyupgrade by @nsoranzo in #16035

• De-duplicate code around object store caches. by @jmchilton in #16108

• Improved Cache Monitoring for Object Stores by @jmchilton in #16110

• De-duplication and improvements to the in-process object store cache monitor by @jmchilton in #16111

• Refactor caching object stores ahead of adding task-based store. by @jmchilton in #16144

Other changes

• Follow up on object store selection PR. by @jmchilton in #15654

23.0.6 (2023-10-23)

Bug fixes

• Fix extra files path handling by @mvdbeek in #16541

• Fixes for extra files handling and cached object stores by @mvdbeek in #16595

23.0.5 (2023-07-29)

No recorded changes since last release

23.0.4 (2023-06-30)

No recorded changes since last release

23.0.3 (2023-06-26)

No recorded changes since last release

23.0.2 (2023-06-13)

No recorded changes since last release

23.0.1 (2023-06-08)

No recorded changes since last release

20.9.1 (2021-03-01)

• Second release from the 20.09 branch of Galaxy.

20.9.0 (2020-10-15)

• First release from the 20.09 branch of Galaxy.

20.5.0 (2020-07-04)

• First release from the 20.05 branch of Galaxy.

19.9.0 (2019-12-16)

• Initial import from dev branch of Galaxy during 19.09 development cycle.