fast and memory-efficient genomic k-mer calculations
Project description
Introduction
This Python package implements objects and functions that allow for fast and memory-efficient k-mer calculations on the genome. See the genome-kmers homepage for a detailed overview, examples, dev setup, and API reference.
This package can be installed via PyPI
pip install genome-kmers
or via cloning the repo and installing (e.g. using poetry)
git clone git@github.com:mrperkett/genome-kmers.git
cd genome-kmers/
poetry install
# run tests to verify everything is working properly
poetry run python -m pytest
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