Skip to main content

Generates sequence matches given FNA files and a regex expression

Project description

Genome

Given a list of regex sequences look on FNA files for its match

Usage

python3 main.py data --output csv

Install locally

Requires having pipx and poetry

pipx install poetry
poetry install
genome

Example sequences

Please check the patterns file

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

genome_seq_finder-0.1.0.tar.gz (3.9 kB view hashes)

Uploaded Source

Built Distribution

genome_seq_finder-0.1.0-py3-none-any.whl (5.0 kB view hashes)

Uploaded Python 3

Supported by

AWS AWS Cloud computing and Security Sponsor Datadog Datadog Monitoring Fastly Fastly CDN Google Google Download Analytics Microsoft Microsoft PSF Sponsor Pingdom Pingdom Monitoring Sentry Sentry Error logging StatusPage StatusPage Status page