Various genomics tools and scripts used in the GHFC lab
Project description
ghfc-utils
set of small tools designed to help automatize simple task locally or on Pasteur's cluster.
- slivar-reannotate for the postprocessing of slivar files including filtering and geneset reannotation.
- slivar-dnm for the computation of a prediction score about the veracity of de novo mutations
Installation
pip install ghfc-utils
PS. on maestro, do not forget to load Python first (not needed anymore once installed):
module load Python/3.9.16
Installation using uv
TODO
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distributions
No source distribution files available for this release.See tutorial on generating distribution archives.
Built Distribution
Filter files by name, interpreter, ABI, and platform.
If you're not sure about the file name format, learn more about wheel file names.
Copy a direct link to the current filters
File details
Details for the file ghfc_utils-0.1.0-py3-none-any.whl.
File metadata
- Download URL: ghfc_utils-0.1.0-py3-none-any.whl
- Upload date:
- Size: 32.2 kB
- Tags: Python 3
- Uploaded using Trusted Publishing? No
- Uploaded via: uv/0.5.7
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
49f26639ced17dfc621631e4f27c5e9c4d22442e9567bbe206f2b55316608eb5
|
|
| MD5 |
356788d0e674b01c596effe061d52fb0
|
|
| BLAKE2b-256 |
122ff4cc43296bc2aa883ae3c582c38e358cbab243131430bc2776657c94a222
|
