grilly 0.3.6

GPU-accelerated neural network operations using Vulkan compute shaders

Grilly

Deep learning, well done.

Alpha software. Not production-ready. APIs may change. We welcome early adopters and feedback.

GPU-accelerated neural network framework using Vulkan compute shaders. No CUDA required. Supports AMD, NVIDIA, and Intel GPUs.

Documentation: https://grilly.readthedocs.io/

Release Status

• Current release line: v0.3.5
• Package name: grilly
• Python support: >=3.12
• Release channel: PyPI

Versioning is automated via setuptools-scm from git tags (e.g. v0.3.1 → 0.3.1).

Features

Neural Network Operations

• Feedforward Networks: Linear layers, activations (ReLU, GELU, SiLU, SoftMax, SwiGLU, RoSwish, GCU)
• Convolutional Networks: Conv2D, MaxPool2D, AvgPool2D, BatchNorm2D (forward and backward)
• Recurrent Networks: LSTM cells
• Attention Mechanisms: Flash Attention 2, multi-head attention, RoPE, prosody modulation
• Normalization: LayerNorm, RMSNorm, BatchNorm
• Activations: GELU, SiLU, ReLU, SoftMax, SoftPlus, SwiGLU, GEGLU, ReGLU, RoSwish, GCU
• Fused Operations: Linear+activation fusion, QKV projection, layer normalization+linear

Spiking Neural Networks

• Neuron Models: LIF (Leaky Integrate-and-Fire), GIF (Generalized Integrate-and-Fire)
• Learning: STDP (Spike-Timing-Dependent Plasticity), Hebbian learning
• Synaptic Dynamics: Forward propagation, STDP traces, weight updates
• Bridges: Continuous-to-spike, spike-to-continuous conversion
• Operations: SNN matmul, softmax, readout, expert readout

Memory & Retrieval

• Memory Operations: Read, write, context aggregation
• Memory Injection: Concatenation, gating, residual connections
• Capsule Networks: Capsule projection, dentate gyrus sparse expansion
• FAISS Integration: Distance computation, top-k selection, IVF filtering, quantization, k-means

Learning Algorithms

• Optimization: Adam, natural gradients, Fisher information matrix
• Continual Learning: EWC (Elastic Weight Consolidation), Fisher penalties
• Adaptive Filtering: NLMS (Normalized Least Mean Squares), ensemble, prediction
• Regularization: Dropout, whitening transforms

Specialized Operations

• Place & Time Cells: Spatial encoding, temporal encoding, theta-gamma oscillations
• FFT: Bit-reversal, butterfly operations, magnitude, power spectrum
• Domain Adaptation: Domain classification, routing, expert combination
• Embeddings: Lookup, position encoding, attention, FFN, pooling, normalization
• Loss Functions: Cross-entropy, BCE, contrastive loss
• Semantic Encoding: Affect MLP, affective processing

Transformer Support

• Architecture-Specific Optimizations: BERT, GPT, T5, RoBERTa, DistilBERT, MPNet, XLM-RoBERTa, ALBERT
• HuggingFace Bridge: Load pre-trained models without PyTorch runtime
• Model Components: Multi-head attention, positional encoding, layer normalization
• Fine-Tuning: LoRA (Low-Rank Adaptation), gradient checkpointing

LoRA Fine-Tuning

• Parameter-efficient fine-tuning for transformers
• Backward pass support for LoRA layers
• Memory-efficient training on 12GB VRAM

Installation

From PyPI

pip install grilly

From Source

git clone https://github.com/grillcheese-ai/grilly.git
cd grilly
make install

# Or with development dependencies
make install-dev

# Or manually
pip install -e .

Requirements

• Python >= 3.12
• Vulkan drivers
• NumPy
• Supported GPUs: AMD (tested on RX 6750 XT), NVIDIA, Intel Arc

Quick Start

import grilly
import numpy as np

# Initialize compute backend
backend = grilly.Compute()

# Spiking neural network example
input_current = np.random.randn(1000).astype(np.float32)
membrane = np.zeros(1000, dtype=np.float32)
refractory = np.zeros(1000, dtype=np.float32)

membrane, refractory, spikes = backend.snn.lif_step(
    input_current, membrane, refractory,
    dt=0.001, tau_mem=20.0, v_thresh=1.0
)

# Feedforward network example
x = np.random.randn(32, 384).astype(np.float32)
weight = np.random.randn(384, 128).astype(np.float32)
bias = np.zeros(128, dtype=np.float32)

output = backend.fnn.linear(x, weight, bias)
activated = backend.fnn.swiglu(output)

# Flash Attention 2
q = np.random.randn(32, 8, 64, 64).astype(np.float32)  # (batch, heads, seq, dim)
k = np.random.randn(32, 8, 64, 64).astype(np.float32)
v = np.random.randn(32, 8, 64, 64).astype(np.float32)

attention_out = backend.attention.flash_attention2(q, k, v)

# FAISS similarity search
query = np.random.randn(1, 384).astype(np.float32)
database = np.random.randn(10000, 384).astype(np.float32)

distances = backend.faiss.compute_distances(query, database)
top_k_distances, top_k_indices = backend.faiss.topk(distances, k=10)

API Reference

Core Interfaces

• grilly.Compute() - Main compute backend (alias for VulkanCompute)
• grilly.SNNCompute() - High-level spiking neural network interface
• grilly.Learning() - Learning algorithms (EWC, NLMS, etc.)

Backend Namespaces

• backend.snn.* - Spiking neural network operations
• backend.fnn.* - Feedforward network operations
• backend.attention.* - Attention mechanisms
• backend.memory.* - Memory operations
• backend.faiss.* - Vector similarity search
• backend.learning.* - Learning algorithms
• backend.cells.* - Place and time cells

Shader Statistics

• Total GLSL shaders: 154
• Compiled SPIR-V shaders: 154
• Categories: 12+ operation types

Compiling Shaders

Shaders are pre-compiled and included. To recompile:

# Compile all shaders (cross-platform)
make compile-shaders

# Verify compilation
make verify-shaders

# Or manually:
# Windows: .\scripts\compile_all_shaders.ps1
# Linux/Mac: ./compile_shaders.sh

# Single shader
glslc shader.glsl -o spv/shader.spv

GPU Selection

# Set GPU index (if multiple GPUs)
export VK_GPU_INDEX=0

# Enable debug logging
export GRILLY_DEBUG=1

# Allow CPU fallback
export ALLOW_CPU_VULKAN=1

Testing

# All tests (requires Vulkan)
make test

# CPU-only tests (no GPU required - for CI)
make test-cpu

# GPU tests only
make test-gpu

# With coverage report
make test-coverage

# Or use pytest directly
pytest tests/ -v                    # all tests
pytest tests/ -m "not gpu" -v       # CPU-only
pytest tests/ -m "gpu" -v          # GPU-only

Architecture

Grilly uses Vulkan compute shaders for cross-platform GPU acceleration. Each operation is implemented as a GLSL compute shader compiled to SPIR-V bytecode.

Design Principles

• Pure Vulkan backend (no CUDA dependency)
• Hardware-agnostic (AMD, NVIDIA, Intel)
• Zero-copy GPU memory operations
• Minimal CPU-GPU transfers
• CPU fallback for unsupported operations

Performance

Tested on AMD RX 6750 XT (12GB VRAM):

• LIF neuron simulation: 1M neurons at >1000 FPS
• Flash Attention 2: 32 batch, 8 heads, 512 seq length at ~50ms
• FAISS top-k: 10K vectors, 384D, k=10 at ~5ms

Built for GrillCheese AI

Grilly powers GrillCheese AI, a neuromorphic language system that replaces pure transformer stacks with brain-inspired modules — hippocampal memory, thalamic routing, amygdala affect, and Oja-rule online plasticity — all running on Vulkan compute. The research explores four hypotheses:

• H1 (Architecture): Modular neuromorphic design can match transformers while enabling episodic memory, continual learning, and affect-driven routing.
• H2 (Efficiency): Vulkan-accelerated SSM training can reach >10,000 tok/s on a single consumer GPU — no CUDA or cloud required.
• H3 (Memory): Capsule encoding (768D to 32D) with dentate gyrus sparse expansion preserves information for hippocampal retrieval via Matryoshka representation learning.
• H4 (Plasticity): Online Oja-rule weight updates enable continual adaptation without catastrophic forgetting.

Grilly v1.0 will ship alongside the GrillCheese AI public release.

Examples

A minimal forward + backward pass:

import grilly.nn as nn

layer = nn.Linear(128, 10)
x = nn.randn(32, 128, requires_grad=True)

logits = x @ nn.Variable(layer.weight.T) + nn.Variable(layer.bias)
loss = logits.sum()
loss.backward()

print(x.grad.shape)  # (32, 128)

See examples/ for more:

• hello_grilly.py — Autograd forward + backward
• train_mlp.py — Full training loop with AdamW and cross-entropy
• benchmark_gemm.py — GPU vs CPU GEMM throughput table
• 14 experimental examples (VSA, MoE, capsules, cognitive control, and more)

Development

Quick Start

# Clone and setup
git clone https://github.com/grillcheese-ai/grilly.git
cd grilly

# Install with dev dependencies
make install-dev

# Run tests
make test

# Format code
make format

# Run linters
make lint

# Build package
make build

Project Structure

grilly/
├── .github/workflows/  # CI (lint, test, build) and CD (PyPI publish)
├── backend/            # Vulkan backend implementation
├── mcp-servers/        # MCP servers for AI coders
│   ├── grilly/         # TypeScript MCP server (grilly_docs, grilly_example, etc.)
│   └── elephant-coder/ # Codebase memory (Python)
├── nn/                 # High-level neural network modules
├── shaders/            # GLSL compute shaders
│   └── spv/            # Compiled SPIR-V bytecode
├── tests/              # Test suite
├── utils/              # HuggingFace bridge, utilities
└── Makefile            # Build automation

MCP Server for AI Coders

The grilly MCP server (mcp-servers/grilly/) helps AI assistants use Grilly:

• grilly_docs — API docs (overview, quickstart, snn, fnn, attention, faiss)
• grilly_example — Example code snippets
• grilly_list_ops — List backend operations
• grilly_run_python — Execute Python snippets

cd mcp-servers/grilly && npm install && npm run build

Makefile Commands

Run make help to see all available commands:

• make install - Install package
• make test - Run tests
• make compile-shaders - Compile shaders
• make build - Build distribution
• make format - Format code
• make lint - Run linters
• make clean - Clean build artifacts

CI/CD

• CI (on push/PR): Lint (ruff), test (CPU-only), build
• CD (on release): Build, publish to PyPI via Trusted Publishing

Releases are published automatically when you create a GitHub Release with a tag (e.g. v0.3.1). No API token needed — uses PyPI Trusted Publishing (OIDC).

One-time setup: Trusted Publisher on PyPI

1. Go to pypi.org/manage/projects → Manage → Publishing
2. Add a GitHub publisher:
   • Owner: grillcheese-ai
   • Repository: grilly
   • Workflow name: publish.yml

Manual publish (local)

make build
twine upload dist/*
# Requires PyPI API token (create at pypi.org/manage/account/token/)

For Test PyPI: twine upload --repository testpypi dist/*

Contributing

1. Fork the repository
2. Create a feature branch
3. Add tests for new features
4. Run make check to verify
5. Submit a pull request

Roadmap and Community

Open an issue. Tell us what to implement or optimize.

Current priorities:

• Training throughput (GEMM tiling, fused backward shaders)
• Backward pass coverage for all operations
• INT8/INT4 quantization kernels
• Documentation and tutorials

License

MIT License - see LICENSE file for details.