The tool gwas2vcf can convert GWAS results files, like the .tsv.bgz files from UK Biobank studies, into the standard VCF 4.0 format.
For best results, it's recommended to create a virtual environment with Python 3.11.6, as that's the version this tool was tested with.
USAGE:: $ gwas2vcf -i INPUT -o OUTPUT
For help:: $ gwas2vcf -h
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Release files for gwas2vcf 0.1.9
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Source distribution (sdist)
| File | Size | Uploaded | |
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| gwas2vcf-0.1.9.tar.gz | 3.0 kB | Details |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Reset |
|---|---|---|---|---|
| gwas2vcf-0.1.9-py3-none-any.whl | Python 3 | none | any | Details |
Total release size: 6.3 kB
Release files / gwas2vcf-0.1.9.tar.gz
| Download URL | gwas2vcf-0.1.9.tar.gz |
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| Size | 3.0 kB |
| Tags | Source |
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Release files / gwas2vcf-0.1.9-py3-none-any.whl
| Download URL | gwas2vcf-0.1.9-py3-none-any.whl |
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| Size | 3.3 kB |
| Tags | Python 3 |
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