Visualise genomics data fast
Project description
gwplot
gwplot is a plotting library for genomics data and a Python interface to GW, a high-performance interactive genome browser.
Visit the documentation for more details
Installation
pip install gwplot
Quick Start
from gwplot import Gw
# Initialise with reference genome
gw = Gw("reference.fa")
# Add data sources
gw.add_bam("sample.bam")
gw.add_track("variants.vcf")
# Set region to view
gw.add_region("chr1", 1000000, 1100000)
# Render and save
gw.save_png("output.png")
Contributing
Contributions are welcome! Please feel free to submit a Pull Request.
License
Project details
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distributions
Built Distributions
Filter files by name, interpreter, ABI, and platform.
If you're not sure about the file name format, learn more about wheel file names.
Copy a direct link to the current filters
File details
Details for the file gwplot-0.4.1-cp313-cp313-manylinux_2_28_x86_64.whl.
File metadata
- Download URL: gwplot-0.4.1-cp313-cp313-manylinux_2_28_x86_64.whl
- Upload date:
- Size: 66.4 MB
- Tags: CPython 3.13, manylinux: glibc 2.28+ x86-64
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/6.0.1 CPython/3.12.8
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
b8e5b0964df3850140f0d2ac15f048754ba21c1c8e438d374732d0d639ae215d
|
|
| MD5 |
705285f748fceda56d9b2853bdbac6f6
|
|
| BLAKE2b-256 |
aeeff0dd14347136eca33775389db4769ce0391406b0d2b286591e2a13d540d1
|
File details
Details for the file gwplot-0.4.1-cp313-cp313-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.
File metadata
- Download URL: gwplot-0.4.1-cp313-cp313-manylinux_2_17_x86_64.manylinux2014_x86_64.whl
- Upload date:
- Size: 71.5 MB
- Tags: CPython 3.13, manylinux: glibc 2.17+ x86-64
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/6.0.1 CPython/3.12.8
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
74261e269e41de3e80ec229614aac5271f6795e395f671f183011912783517e0
|
|
| MD5 |
be657bc2557589c8e39a1874e17f0a57
|
|
| BLAKE2b-256 |
e17c5be79230eb84b4533b647598cf9306dc77d520cb07d3d49263fd1269072a
|
File details
Details for the file gwplot-0.4.1-cp313-cp313-macosx_15_0_arm64.whl.
File metadata
- Download URL: gwplot-0.4.1-cp313-cp313-macosx_15_0_arm64.whl
- Upload date:
- Size: 27.0 MB
- Tags: CPython 3.13, macOS 15.0+ ARM64
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/6.0.1 CPython/3.12.8
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
8f804ada309bdafd050ffdcb335debe42b6a81bfa3e41e0e67aed9c569f302d9
|
|
| MD5 |
9de0635f73be23b559450d14752ec0ce
|
|
| BLAKE2b-256 |
42e5b8d63472bc64a7e358c16cb52ac1c41aa2c44c4a5823fe800217183a7fdc
|
File details
Details for the file gwplot-0.4.1-cp313-cp313-macosx_13_0_x86_64.whl.
File metadata
- Download URL: gwplot-0.4.1-cp313-cp313-macosx_13_0_x86_64.whl
- Upload date:
- Size: 31.1 MB
- Tags: CPython 3.13, macOS 13.0+ x86-64
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/6.0.1 CPython/3.12.8
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
8ab97c4fc9589493f1b6d2fda49fc7cc93e10d7e636ae2c5494b5a8c14d115d1
|
|
| MD5 |
dca179fe53d131fe4569b96a05871ae8
|
|
| BLAKE2b-256 |
7cb1dfc7323bf9fea2dd6a91f11150dd82843d5e89c15d91120eca699a622ea5
|
File details
Details for the file gwplot-0.4.1-cp312-cp312-manylinux_2_28_x86_64.whl.
File metadata
- Download URL: gwplot-0.4.1-cp312-cp312-manylinux_2_28_x86_64.whl
- Upload date:
- Size: 66.4 MB
- Tags: CPython 3.12, manylinux: glibc 2.28+ x86-64
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/6.0.1 CPython/3.12.8
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
a5f10b0e2b01c121f07dd9c29ce32fc75141382b7a9a75be7aa9c36a7c9560c5
|
|
| MD5 |
79f64f1e42b666b7599fb599dbf82dc8
|
|
| BLAKE2b-256 |
29a4734d31842bbfd906fd1672c130ef06b4c06596ef6251d8349cc97a552e1d
|
File details
Details for the file gwplot-0.4.1-cp312-cp312-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.
File metadata
- Download URL: gwplot-0.4.1-cp312-cp312-manylinux_2_17_x86_64.manylinux2014_x86_64.whl
- Upload date:
- Size: 71.5 MB
- Tags: CPython 3.12, manylinux: glibc 2.17+ x86-64
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/6.0.1 CPython/3.12.8
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
84cdf10372a091c8fb80e04f8fd27c850ae7884956193c2b97b365dead923c66
|
|
| MD5 |
099240538b48c0d71e2746bdaaffbfc2
|
|
| BLAKE2b-256 |
e65601b0ba563d660443509136f488a8a24480d56018a3037d3515c05acba7d5
|
File details
Details for the file gwplot-0.4.1-cp312-cp312-macosx_15_0_arm64.whl.
File metadata
- Download URL: gwplot-0.4.1-cp312-cp312-macosx_15_0_arm64.whl
- Upload date:
- Size: 27.0 MB
- Tags: CPython 3.12, macOS 15.0+ ARM64
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/6.0.1 CPython/3.12.8
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
04048fec64a21a0cff027a9d4e57add75bf9040b2bbe29c3548d5ba9f2539fe9
|
|
| MD5 |
5f72d217a1c4169b42ba24015a2f557b
|
|
| BLAKE2b-256 |
451749e9ebcacdbee485b5fff509647d068d96254650d43402a04cd8b751063e
|
File details
Details for the file gwplot-0.4.1-cp312-cp312-macosx_13_0_x86_64.whl.
File metadata
- Download URL: gwplot-0.4.1-cp312-cp312-macosx_13_0_x86_64.whl
- Upload date:
- Size: 31.1 MB
- Tags: CPython 3.12, macOS 13.0+ x86-64
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/6.0.1 CPython/3.12.8
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
c34d0e4425705ca2a53706297a980b511155993440e2d0a474c92c81e1a0cb31
|
|
| MD5 |
cf05eb81d13cb2c110cbf124b3d53f46
|
|
| BLAKE2b-256 |
98bf26a8a4ad9c5315fc009214e8cf2621d9fa814a21524cac9e633b3a11f048
|
File details
Details for the file gwplot-0.4.1-cp311-cp311-manylinux_2_28_x86_64.whl.
File metadata
- Download URL: gwplot-0.4.1-cp311-cp311-manylinux_2_28_x86_64.whl
- Upload date:
- Size: 66.4 MB
- Tags: CPython 3.11, manylinux: glibc 2.28+ x86-64
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/6.0.1 CPython/3.12.8
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
79374ef51ed14a127d79af6d215377af993346257d3e0335328cc644f6baeb27
|
|
| MD5 |
c5a8bc598f8243a9c7fd12d7bb742dba
|
|
| BLAKE2b-256 |
bbd9671733674e61f9660e69811f0c53be5cb3d5a6637ca22f3dfd2e62b9910a
|
File details
Details for the file gwplot-0.4.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.
File metadata
- Download URL: gwplot-0.4.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl
- Upload date:
- Size: 71.6 MB
- Tags: CPython 3.11, manylinux: glibc 2.17+ x86-64
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/6.0.1 CPython/3.12.8
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
c6d2a4fb16ba38d1c0e9c90c08305f384ad50353eacedae6b68a66fdc37cff00
|
|
| MD5 |
ac2cec54f64043ba0e817e0974854a95
|
|
| BLAKE2b-256 |
7dd2a57a84338ac871110fbc82fd9d9eade4ba4aab3a9eac22da5e53d6ac9f25
|
File details
Details for the file gwplot-0.4.1-cp311-cp311-macosx_15_0_arm64.whl.
File metadata
- Download URL: gwplot-0.4.1-cp311-cp311-macosx_15_0_arm64.whl
- Upload date:
- Size: 27.0 MB
- Tags: CPython 3.11, macOS 15.0+ ARM64
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/6.0.1 CPython/3.12.8
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
d21b3490de81ef03238de9bf23afe6152ceaa5c41da23e64660a94159ad95350
|
|
| MD5 |
ab15a9bc4a2038641883f7f52ebaa47f
|
|
| BLAKE2b-256 |
a7199ac7ff174acfc4abbd9e1d6c2706af0957fc166eadefaf2fc9c08b23a50f
|
File details
Details for the file gwplot-0.4.1-cp311-cp311-macosx_13_0_x86_64.whl.
File metadata
- Download URL: gwplot-0.4.1-cp311-cp311-macosx_13_0_x86_64.whl
- Upload date:
- Size: 31.1 MB
- Tags: CPython 3.11, macOS 13.0+ x86-64
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/6.0.1 CPython/3.12.8
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
151208e9b4cf6d82a4dc7cc122dfb05b3cc58009a52c09dfdb4fe0ca9255b888
|
|
| MD5 |
11cbde8bbfacf5192cb1f27214cc1f75
|
|
| BLAKE2b-256 |
0a1c7a543e6127bcd207459da9898f6d10eb06a4937154924dd134b4f8ec7eeb
|
File details
Details for the file gwplot-0.4.1-cp310-cp310-manylinux_2_28_x86_64.whl.
File metadata
- Download URL: gwplot-0.4.1-cp310-cp310-manylinux_2_28_x86_64.whl
- Upload date:
- Size: 66.4 MB
- Tags: CPython 3.10, manylinux: glibc 2.28+ x86-64
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/6.0.1 CPython/3.12.8
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
c939d19a5ac2724862c443e091541396bf4634af05eec8530b23e6756e313444
|
|
| MD5 |
d822ef1979c6399ff2dd067f1b62479a
|
|
| BLAKE2b-256 |
66f4b252355082d5ce3fce038a83b3da0a6eb56532664443cd29f55690bfcfb7
|
File details
Details for the file gwplot-0.4.1-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.
File metadata
- Download URL: gwplot-0.4.1-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl
- Upload date:
- Size: 71.5 MB
- Tags: CPython 3.10, manylinux: glibc 2.17+ x86-64
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/6.0.1 CPython/3.12.8
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
2bb37c6005d5963c9c086101805d7629c336ea32d9ab4fd99807ee38366063e9
|
|
| MD5 |
d3eef67f04ce096f0ecf68df008b6671
|
|
| BLAKE2b-256 |
b374410e7ff968258599fd18457734cbf1d577067edd023749112a3e39300500
|
File details
Details for the file gwplot-0.4.1-cp310-cp310-macosx_15_0_arm64.whl.
File metadata
- Download URL: gwplot-0.4.1-cp310-cp310-macosx_15_0_arm64.whl
- Upload date:
- Size: 27.0 MB
- Tags: CPython 3.10, macOS 15.0+ ARM64
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/6.0.1 CPython/3.12.8
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
49be2a999c0339e98e032d9b95f5a7f7d7c061276c47ad7049b4be59801eb3f7
|
|
| MD5 |
1e7058843d6dc0cd4880d8da4dead68d
|
|
| BLAKE2b-256 |
d4aafbd6c57843fae329e6038a39ebe8da51870058a837743c50c96165c1a5f1
|
File details
Details for the file gwplot-0.4.1-cp310-cp310-macosx_13_0_x86_64.whl.
File metadata
- Download URL: gwplot-0.4.1-cp310-cp310-macosx_13_0_x86_64.whl
- Upload date:
- Size: 31.1 MB
- Tags: CPython 3.10, macOS 13.0+ x86-64
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/6.0.1 CPython/3.12.8
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
283fd985cb4095c76f2ba9a5e0c2a994f174f2c6a0dc709a2b17e4c7c403d23e
|
|
| MD5 |
d831f24b5108a01a9ffe276bc57abb57
|
|
| BLAKE2b-256 |
505ac68bcbde22d59a7f7ca83adb4ec4954d2d5294bfb1691de3c445430db418
|
File details
Details for the file gwplot-0.4.1-cp39-cp39-macosx_15_0_arm64.whl.
File metadata
- Download URL: gwplot-0.4.1-cp39-cp39-macosx_15_0_arm64.whl
- Upload date:
- Size: 27.0 MB
- Tags: CPython 3.9, macOS 15.0+ ARM64
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/6.0.1 CPython/3.12.8
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
4656f832bd4601e17de60b0d963ba2fd770f56ca1f61982cc48f82a22248a011
|
|
| MD5 |
f21271f72f020324ca64ccd4ae439295
|
|
| BLAKE2b-256 |
9902a511d2fa5ca146819c895175a7fcf9667099a3e80574772c9064c80771ce
|
File details
Details for the file gwplot-0.4.1-cp39-cp39-macosx_13_0_x86_64.whl.
File metadata
- Download URL: gwplot-0.4.1-cp39-cp39-macosx_13_0_x86_64.whl
- Upload date:
- Size: 31.1 MB
- Tags: CPython 3.9, macOS 13.0+ x86-64
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/6.0.1 CPython/3.12.8
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
eb8365714e5afdc3e2de768a2cc7c0f4ca742e0ee4930c7bb0ca9434cfd491ac
|
|
| MD5 |
b6e730b0a207f977ac6fe790ff344573
|
|
| BLAKE2b-256 |
0157f3dbba56db2bfcb2177f04b7ed61351678ccdd07926300e05c34e0fbe877
|