Matrix implementations for hetnets and path-count-based measures
hetmatpy: a Python 3 package for matrix operations of hetnets
This codebase enables identifying the relevant network connections between a set of query nodes. The method is designed to operate on hetnets (networks with multiple node or relationship types).
This project is still under development. Use with caution.
Install via pip from GitHub using:
# install the latest release from PyPI pip install hetmatpy # install latest version on GitHub pip install git+https://github.com/hetio/hetmatpy # for local development, run the following inside the development environment: pip install --editable .
This repo uses pre-commit checks:
# run once per local repo before committing pre-commit install
This work is supported through a research collaboration with Pfizer Worldwide Research and Development. This work is funded in part by the Gordon and Betty Moore Foundation’s Data-Driven Discovery Initiative through Grants GBMF4552 to Casey Greene and GBMF4560 to Blair Sullivan.
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