IgDiscover
IgDiscover analyzes antibody repertoires and discovers new V genes from high-throughput sequencing reads. Heavy chains, kappa and lambda light chains are supported (to discover VH, VK and VL genes).
IgDiscover is the result of a collaboration between the Gunilla Karlsson Hedestam group at the Department of Microbiology, Tumor and Cell Biology at Karolinska Institutet, Sweden and the Bioinformatics Long-Term Support facility at Science for Life Laboratory (SciLifeLab), Sweden.
If you use IgDiscover, please cite:
Corcoran, Martin M. and Phad, Ganesh E. and Bernat, Néstor Vázquez and Stahl-Hennig, Christiane and Sumida, Noriyuki and Persson, Mats A.A. and Martin, Marcel and Karlsson Hedestam, Gunilla B.Production of individualized V gene databases reveals high levels of immunoglobulin genetic diversity.Nature Communications 7:13642 (2016)
Links
Release files for igdiscover 0.15.1
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | |
|---|---|---|---|
| igdiscover-0.15.1.tar.gz | 253.3 kB | Details |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Reset |
|---|---|---|---|---|
| igdiscover-0.15.1-py3-none-any.whl | Python 3 | none | any | Details |
Total release size: 363.1 kB
Release files / igdiscover-0.15.1.tar.gz
| Download URL | igdiscover-0.15.1.tar.gz |
|---|---|
| Size | 253.3 kB |
| Tags | Source |
|
SHA-256 checksum How to use checksums |
534f0e81b71acabe24577f0989832c61e69b73e0e562eb147b1af38c4c9bf725
|
|
BLAKE2b-256 checksum How to use checksums |
7b98383bc2105c3945e1908175338bd9792f0ef627f4128301013e6ee51d5753
|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/4.0.0 CPython/3.9.12
|
Release files / igdiscover-0.15.1-py3-none-any.whl
| Download URL | igdiscover-0.15.1-py3-none-any.whl |
|---|---|
| Size | 109.8 kB |
| Tags | Python 3 |
|
SHA-256 checksum How to use checksums |
7bb27ae586d8113ffa04388ebafe341cdcb007c072a6522312d71420b4044edd
|
|
BLAKE2b-256 checksum How to use checksums |
6470796a2bddb7eb30edcb13d92d3a245360fff1a250d250400ed689020ae4dd
|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/4.0.0 CPython/3.9.12
|
