imodmodel
Read and write IMOD model files as pandas dataframes in Python.
Usage
Read IMOD models as pandas DataFrame
import imodmodel
df = imodmodel.read('my_model_file.mod')
In [3]: df.head()
Out[3]:
object_id contour_id x y z
0 0 0 64.333336 64.666664 80.0
1 0 0 47.000000 77.333336 80.0
2 0 0 51.333332 45.666668 80.0
3 0 0 87.333336 49.666668 80.0
4 0 0 76.000000 82.000000 80.0
Write IMOD models from a pandas DataFrame
imodmodel.write(df, 'my_new_modelfile.mod')
For more advanced use cases we also provide an object-based API. Please consult our Documentation.
Installation
imodmodel can be installed from the Python Package Index (PyPI)
pip install imodmodel
We recommend installing into a clean virtual environment.
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