InterScale
InterScale is a package for cell interaction analysis in spatial transcriptomics data. It is build on top of PyG (via geome), AnnData, scanpy squidpy and scvi-tools.
Resources
- An installation guide, tutorials and API documentation is available in the documentation.
- Check out our seperate reproduciblity repository to reproduce the figures for the manuscript
- Please use issues to submit bug reports.
- If you would like to contribute, check out the contributing guide.
- If you find InterScale useful for your research, please consider citing the InterScale preprint.
Reference
@article{DrummerJimenez2026,
author = {Drummer, F. and Jimenez, S. et al.},
title = {InterScale reveals multi-scale cellular interaction programs in spatial transcriptomics},
journal = {BioArvix},
year = {2026},
doi = {???},
url = {???}
}
Metadata
Release files for interscale 0.0.1
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | Provenance | Actions |
|---|---|---|---|---|
| interscale-0.0.1.tar.gz | 2.8 MB | With provenance | Details for interscale-0.0.1.tar.gz |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Actions Reset |
|---|---|---|---|---|
| interscale-0.0.1-py3-none-any.whl | Python 3 | none | any | Details for interscale-0.0.1-py3-none-any.whl |
Total release size: 2.9 MB
Release files / interscale-0.0.1.tar.gz
| Download URL | interscale-0.0.1.tar.gz |
|---|---|
| Size | 2.8 MB |
| Tags | Source |
|
SHA-256 checksum How to use checksums |
f3dfd3c9b6f252a2341e19de83b211fba26e53323587bc90d7786b64a26fd309
|
|
BLAKE2b-256 checksum How to use checksums |
d359719bd07ee06d471147ec2cf1ced2ef7b96058ab35c39c655caaefc9fe61c
|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
Yes |
| Uploaded via |
twine/6.1.0 CPython/3.13.12
|
Provenance
Provenance describes where a file came from. On PyPI, provenance is shared via attestations, which provide a verifiable record of the build or publishing details. View details, limitations and caveats.
PyPI Publish Attestation
PyPI verified that this artifact, at this checksum, originated from the publisher listed below.
Signed by GitHub Actions, verified by PyPI on May 5, 2026.
Transparency logRelease files / interscale-0.0.1-py3-none-any.whl
| Download URL | interscale-0.0.1-py3-none-any.whl |
|---|---|
| Size | 117.7 kB |
| Tags | Python 3 |
|
SHA-256 checksum How to use checksums |
1b2d41d8bfc423e0c511588a29689a8356e46e90decbc08cc21492bedc425d9c
|
|
BLAKE2b-256 checksum How to use checksums |
3180e2e85d0c007554255dcbf2c984d834677270359ec6dc6fe7a0e411a1833c
|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
Yes |
| Uploaded via |
twine/6.1.0 CPython/3.13.12
|
Provenance
Provenance describes where a file came from. On PyPI, provenance is shared via attestations, which provide a verifiable record of the build or publishing details. View details, limitations and caveats.
PyPI Publish Attestation
PyPI verified that this artifact, at this checksum, originated from the publisher listed below.
Signed by GitHub Actions, verified by PyPI on May 5, 2026.
Transparency logSecurity for interscale 0.0.1
Provenance
Provenance describes where a file came from. On PyPI, provenance is shared via attestations, which provide a verifiable record of the build or publishing details. View details, limitations and caveats.
Full provenance
Both files in this release have been uploaded with provenance metadata.
Attestation for interscale-0.0.1.tar.gz
PyPI Publish Attestation
PyPI verified that this artifact, at this checksum, originated from the publisher listed below.
Signed by GitHub Actions, verified by PyPI on May 5, 2026.
Transparency logA note on package security
PyPI is a repository for distributing packages, not a service for auditing them. While third-party security researchers and our staff do their best to detect and remove malicious packages, PyPI cannot guarantee the quality, security or suitability of any given package.
To learn more about protecting yourself from malicious actors, visit our package security documentation.
