Overview
An ITK module to read and write Scanco microCT .isq files.
This package is a resource created by Kitware et. al. for the community for Open and Reproducible Musculoskeletal Imaging Research (ORMIR).
ITK is an open-source, cross-platform library that provides developers with an extensive suite of software tools for image analysis. Developed through extreme programming methodologies, ITK employs leading-edge algorithms for registering and segmenting multidimensional scientific images.
Installation
Python
Binary Python packages are available for Linux, macOS, and Windows. They can be installed with:
python -m pip install --upgrade pip python -m pip install itk-ioscanco
C++
Build the module as a separate project against an ITK build tree:
git clone https://github.com/InsightSoftwareConsortium/ITKIOScanco mkdir ITKIOScanco-build cd ITKIOScanco-build cmake -DITK_DIR=/your/path/to/ITK-build ../ITKIOScanco cmake --build .
Alternatively, since ITK 5.0, the module can be built by enabling the option:
Module_IOScanco:BOOL=ON
in ITK’s CMake configuration.
Usage
import itk
image = itk.imread('myvolume.ISQ')
License
This software is distributed under the Apache 2.0 license. Please see the LICENSE file for details.
4 maintainers
Release files for itk-ioscanco 1.0.1
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Built distributions (wheels)
Total release size: 18.8 MB
Release files / itk_ioscanco-1.0.1-cp311-abi3-win_amd64.whl
| Download URL | itk_ioscanco-1.0.1-cp311-abi3-win_amd64.whl |
|---|---|
| Size | 333.9 kB |
| Tags | CPython 3.11 Windows x86-64 abi3 |
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| Upload date | |
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Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/6.2.0 CPython/3.9.25
|
Release files / itk_ioscanco-1.0.1-cp311-abi3-manylinux_2_28_x86_64.whl
| Download URL | itk_ioscanco-1.0.1-cp311-abi3-manylinux_2_28_x86_64.whl |
|---|---|
| Size | 1.9 MB |
| Tags | CPython 3.11 Linux glibc 2.28+ x86-64 abi3 |
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Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/6.2.0 CPython/3.9.25
|
Release files / itk_ioscanco-1.0.1-cp311-abi3-manylinux_2_28_aarch64.whl
| Download URL | itk_ioscanco-1.0.1-cp311-abi3-manylinux_2_28_aarch64.whl |
|---|---|
| Size | 1.7 MB |
| Tags | CPython 3.11 Linux glibc 2.28+ ARM64 abi3 |
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Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/6.2.0 CPython/3.9.25
|
Release files / itk_ioscanco-1.0.1-cp311-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.whl
| Download URL | itk_ioscanco-1.0.1-cp311-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.whl |
|---|---|
| Size | 2.0 MB |
| Tags | CPython 3.11 Linux glibc 2.17+ x86-64 abi3 |
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Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/6.2.0 CPython/3.9.25
|
Release files / itk_ioscanco-1.0.1-cp311-abi3-macosx_11_0_arm64.whl
| Download URL | itk_ioscanco-1.0.1-cp311-abi3-macosx_11_0_arm64.whl |
|---|---|
| Size | 321.4 kB |
| Tags | CPython 3.11 abi3 macOS 11.0+ ARM64 |
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No |
| Uploaded via |
twine/6.2.0 CPython/3.9.25
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Release files / itk_ioscanco-1.0.1-cp310-cp310-win_amd64.whl
| Download URL | itk_ioscanco-1.0.1-cp310-cp310-win_amd64.whl |
|---|---|
| Size | 334.4 kB |
| Tags | CPython 3.10 Windows x86-64 |
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Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/6.2.0 CPython/3.9.25
|
Release files / itk_ioscanco-1.0.1-cp310-cp310-manylinux_2_28_x86_64.whl
| Download URL | itk_ioscanco-1.0.1-cp310-cp310-manylinux_2_28_x86_64.whl |
|---|---|
| Size | 1.9 MB |
| Tags | CPython 3.10 Linux glibc 2.28+ x86-64 |
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No |
| Uploaded via |
twine/6.2.0 CPython/3.9.25
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Release files / itk_ioscanco-1.0.1-cp310-cp310-manylinux_2_28_aarch64.whl
| Download URL | itk_ioscanco-1.0.1-cp310-cp310-manylinux_2_28_aarch64.whl |
|---|---|
| Size | 1.7 MB |
| Tags | CPython 3.10 Linux glibc 2.28+ ARM64 |
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No |
| Uploaded via |
twine/6.2.0 CPython/3.9.25
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Release files / itk_ioscanco-1.0.1-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl
| Download URL | itk_ioscanco-1.0.1-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl |
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| Size | 2.0 MB |
| Tags | CPython 3.10 Linux glibc 2.17+ x86-64 |
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No |
| Uploaded via |
twine/6.2.0 CPython/3.9.25
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Release files / itk_ioscanco-1.0.1-cp310-cp310-macosx_11_0_arm64.whl
| Download URL | itk_ioscanco-1.0.1-cp310-cp310-macosx_11_0_arm64.whl |
|---|---|
| Size | 315.9 kB |
| Tags | CPython 3.10 macOS 11.0+ ARM64 |
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No |
| Uploaded via |
twine/6.2.0 CPython/3.9.25
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Release files / itk_ioscanco-1.0.1-cp39-cp39-win_amd64.whl
| Download URL | itk_ioscanco-1.0.1-cp39-cp39-win_amd64.whl |
|---|---|
| Size | 335.1 kB |
| Tags | CPython 3.9 Windows x86-64 |
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No |
| Uploaded via |
twine/6.2.0 CPython/3.9.25
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Release files / itk_ioscanco-1.0.1-cp39-cp39-manylinux_2_28_x86_64.whl
| Download URL | itk_ioscanco-1.0.1-cp39-cp39-manylinux_2_28_x86_64.whl |
|---|---|
| Size | 1.9 MB |
| Tags | CPython 3.9 Linux glibc 2.28+ x86-64 |
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Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/6.2.0 CPython/3.9.25
|
Release files / itk_ioscanco-1.0.1-cp39-cp39-manylinux_2_28_aarch64.whl
| Download URL | itk_ioscanco-1.0.1-cp39-cp39-manylinux_2_28_aarch64.whl |
|---|---|
| Size | 1.7 MB |
| Tags | CPython 3.9 Linux glibc 2.28+ ARM64 |
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Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/6.2.0 CPython/3.9.25
|
Release files / itk_ioscanco-1.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl
| Download URL | itk_ioscanco-1.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl |
|---|---|
| Size | 2.0 MB |
| Tags | CPython 3.9 Linux glibc 2.17+ x86-64 |
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Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/6.2.0 CPython/3.9.25
|
Release files / itk_ioscanco-1.0.1-cp39-cp39-macosx_11_0_arm64.whl
| Download URL | itk_ioscanco-1.0.1-cp39-cp39-macosx_11_0_arm64.whl |
|---|---|
| Size | 315.9 kB |
| Tags | CPython 3.9 macOS 11.0+ ARM64 |
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No |
| Uploaded via |
twine/6.2.0 CPython/3.9.25
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