Skip to main content

Download/extract biological FASTA/Q read data and metadata

Project description

Welcome

Kingfisher is a fast and flexible program for procurement of sequence files (and their annotations) from public data sources, including the European Nucleotide Archive (ENA), NCBI SRA, Amazon AWS and Google Cloud. It's input is one or more "Run" accessions e.g. DRR001970, or a BioProject accessions e.g. PRJNA621514 or SRP260223.

For more documentation, see https://wwood.github.io/kingfisher-download/

Kingfisher logo

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

kingfisher-0.3.1.tar.gz (39.6 kB view details)

Uploaded Source

Built Distribution

If you're not sure about the file name format, learn more about wheel file names.

kingfisher-0.3.1-py3-none-any.whl (48.7 kB view details)

Uploaded Python 3

File details

Details for the file kingfisher-0.3.1.tar.gz.

File metadata

  • Download URL: kingfisher-0.3.1.tar.gz
  • Upload date:
  • Size: 39.6 kB
  • Tags: Source
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/4.0.2 CPython/3.11.5

File hashes

Hashes for kingfisher-0.3.1.tar.gz
Algorithm Hash digest
SHA256 2d2dae22f7345a5ad7ba8d64e310a9033667ca09aabdf3bea4ace05a629c388f
MD5 48c3ad436b1faf008a1a716b815d85a0
BLAKE2b-256 61db0de55b90349a2a6496debfffc88565ffa168f4d25b292df8e9f55d5410fa

See more details on using hashes here.

File details

Details for the file kingfisher-0.3.1-py3-none-any.whl.

File metadata

  • Download URL: kingfisher-0.3.1-py3-none-any.whl
  • Upload date:
  • Size: 48.7 kB
  • Tags: Python 3
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/4.0.2 CPython/3.11.5

File hashes

Hashes for kingfisher-0.3.1-py3-none-any.whl
Algorithm Hash digest
SHA256 2cf15cf800fc687277995da6944dc446ab6abbc7733e91b0971de63b94d4ac21
MD5 96647e92162085c3ab78ebb46bd56f14
BLAKE2b-256 273b2904857348d062042e03a456c5f9f58584e012ad52310bdd12e95a4c6348

See more details on using hashes here.

Supported by

AWS Cloud computing and Security Sponsor Datadog Monitoring Depot Continuous Integration Fastly CDN Google Download Analytics Pingdom Monitoring Sentry Error logging StatusPage Status page