KlusterFudge
A Python library for clustering categorical data using the K-Modes algorithm. It supports multiple initialization methods and distance metrics, optimized with numba for performance.
Features
- Algorithms: K-Modes clustering for categorical data
- GPU Acceleration: Optional PyTorch-based GPU acceleration via
KModesGPU - Distance Metrics: Hamming, Jaccard, and NG dissimilarity measures
- Initialization: Random, Huang, and Cao methods
- Optimization: CPU operations accelerated with
numba, GPU operations with PyTorch - Integration: Supports all ArrayLikes (numpy arrays, pandas DataFrames, lists, etc.)
Installation
Install KlusterFudge via pip:
pip install kluster-fudge
Or install from source:
git clone https://github.com/ethqnol/KlusterFudge.git
cd KlusterFudge
pip install .
GPU Acceleration (Optional)
For GPU acceleration, install PyTorch:
pip install torch
See PyTorch installation guide for CUDA/ROCm support.
Quick Start
import pandas as pd
from kluster_fudge import KModes
# 1. Load Data
df = pd.DataFrame({
'color': ['red', 'blue', 'red', 'green', 'blue', 'green'],
'size': ['small', 'large', 'small', 'large', 'medium', 'medium'],
'shape': ['circle', 'square', 'circle', 'square', 'triangle', 'triangle']
})
# 2. Initialize Model
model = KModes(
n_clusters=2,
init_method='cao',
dist_metric='hamming',
random_state=42
)
# 3. Fit and Predict
clusters = model.fit_predict(df)
print("Cluster Labels:", clusters)
GPU Acceleration
For large datasets, use KModesGPU for significant speedups (unless using NG dissimilarity):
from kluster_fudge import KModesGPU
import numpy as np
# Large dataset
X = np.random.randint(0, 10, size=(100000, 20))
# GPU model (auto-detects CUDA/MPS/CPU)
model_gpu = KModesGPU(n_clusters=5, n_init=5, random_state=42)
model_gpu.fit(X)
# 3-6x faster than CPU on typical datasets
Performance: On a 100k sample dataset, GPU achieves ~3.2x speedup on Apple Silicon (MPS) and up to 6x on CUDA GPUs.
Comparisons & Benchmarks
See benchmarks/benchmark_metrics.py
| Metric | Init | Time (s) |
|---|---|---|
| jaccard | cao | 0.051574 |
| jaccard | huang | 0.051677 |
| hamming | cao | 0.052091 |
| hamming | huang | 0.052477 |
| ng | huang | 0.055497 |
| ng | cao | 0.055761 |
| jaccard | random | 0.569103 |
| ng | random | 1.325702 |
| hamming | random | 3.131030 |
(Run on 5000 samples, 20 features, 10 categories)
License
MIT License
Metadata
Release files for kluster-fudge 0.3.1
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Total release size: 27.6 kB
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