A Python library for clustering categorical data using K-Modes with various distance metrics.
Project description
KlusterFudge
A Python library for clustering categorical data using the K-Modes algorithm. It supports multiple initialization methods and distance metrics, optimized with numba for performance.
Features
- Algorithms: K-Modes clustering for categorical data.
- Distance Metrics: Hamming, Jaccard, and NG dissimilarity measures.
- Initialization: Random, Huang, and Cao methods.
- Optimization: Computationally intensive operations are accelerated using
numba. - Integration: Supports all ArrayLikes (e.g. numpy arrays, pandas DataFrames, lists of lists, etc.)
Installation
Install KlusterFudge via pip:
pip install kluster-fudge
Or install from source:
git clone https://github.com/ethqnol/KlusterFudge.git
cd KlusterFudge
pip install .
Quick Start
import pandas as pd
from kluster_fudge import KModes
# 1. Load Data
df = pd.DataFrame({
'color': ['red', 'blue', 'red', 'green', 'blue', 'green'],
'size': ['small', 'large', 'small', 'large', 'medium', 'medium'],
'shape': ['circle', 'square', 'circle', 'square', 'triangle', 'triangle']
})
# 2. Initialize Model
model = KModes(
n_clusters=2,
init_method='cao',
dist_metric='hamming',
random_state=42
)
# 3. Fit and Predict
clusters = model.fit_predict(df)
print("Cluster Labels:", clusters)
Comparisons & Benchmarks
See benchmarks/benchmark_metrics.py
| Metric | Init | Time (s) |
|---|---|---|
| jaccard | cao | 0.051574 |
| jaccard | huang | 0.051677 |
| hamming | cao | 0.052091 |
| hamming | huang | 0.052477 |
| ng | huang | 0.055497 |
| ng | cao | 0.055761 |
| jaccard | random | 0.569103 |
| ng | random | 1.325702 |
| hamming | random | 3.131030 |
(Run on 5000 samples, 20 features, 10 categories)
License
MIT License
Project details
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