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Display and count k-mers from the fasta file

Project description

Counting K-mers from the sequence in fasta format

alt text

Usage:

import kmersfasta
kmersfasta.kmers_from_file('filename.fasta')

where, filename.fasta is the name of the file in fasta format

Counting K-mers from the sequence obtained from NCBI using accession number

Usage:

import kmersfasta
kmersfasta.kmers_from_ncbi('email')

where, email is your email address and you also need to provide the NCBI ACCESSION number during the prompt

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