korbinian
Bioinformatic sequence analysis of membrane proteins.
What is this repository for?
Parsing of UniProt flatfiles
Downloading homologues (primarily with SIMAP)
Parsing BLAST-like XML files
Analysis of protein sequences
Automated figure creation
License
korbinian is released under the permissive MIT licence
Credits
Mark Teese
Martin Ortner
Shenger Wang
Rimma Jenske
Enzo Torasso
Dominik Mueller
Citation
scientific publication to be added
currently cited as “the korbinian python package (Mark Teese, Technical University of Munich)”
Contact
For contact details, see the image below.
Further contact details are available at my staff page within the Langosch lab of the Technical University of Munich.
Example Summary Files
Compare three different membrane protein families:
1 maintainer
Metadata
1 maintainer
Release files for korbinian 0.3.4
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | Provenance | Actions |
|---|---|---|---|---|
| korbinian-0.3.4.tar.gz | 215.1 kB | Without provenance | Details for korbinian-0.3.4.tar.gz |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Actions Reset |
|---|---|---|---|---|
| korbinian-0.3.4-py3-none-any.whl | Python 3 | none | any | Details for korbinian-0.3.4-py3-none-any.whl |
Total release size: 459.8 kB
Release files / korbinian-0.3.4.tar.gz
| Download URL | korbinian-0.3.4.tar.gz |
|---|---|
| Size | 215.1 kB |
| Tags | Source |
|
SHA-256 checksum How to use checksums |
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|
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BLAKE2b-256 checksum How to use checksums |
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Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/1.11.0 pkginfo/1.4.2 requests/2.18.4 setuptools/39.1.0 requests-toolbelt/0.8.0 tqdm/4.23.0 CPython/3.6.3
|
Release files / korbinian-0.3.4-py3-none-any.whl
| Download URL | korbinian-0.3.4-py3-none-any.whl |
|---|---|
| Size | 244.7 kB |
| Tags | Python 3 |
|
SHA-256 checksum How to use checksums |
a3f092555d8ab009d49d3ce7f1c4f3fadc1be866dccacc2163f69f84aa4fdca0
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BLAKE2b-256 checksum How to use checksums |
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| Upload date | |
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Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/1.11.0 pkginfo/1.4.2 requests/2.18.4 setuptools/39.1.0 requests-toolbelt/0.8.0 tqdm/4.23.0 CPython/3.6.3
|
Security for korbinian 0.3.4
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