An attempt to speed-up access to large NWB (Neurodata Without Borders) files stored in the cloud.

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  • License: MIT License (MIT)
  • Author: Ben Hardcastle
  • Requires: Python >=3.9
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Project description

lazynwb

PyPI Python version

Coverage CI/CD GitHub issues

Usage

uv add lazynwb

Python

>>> import lazynwb

Development

See instructions in https://github.com/bjhardcastle/lazynwb/CONTRIBUTING.md and the original template: https://github.com/bjhardcastle/copier-pdm-npc/blob/main/README.md

notes

  • hdf5 access seems to have a mutex lock that threads spend a long time waiting to acquire (with remfile)
  • seems to slow down over time in single-threaded loop
    • on laptop, first 5 are fast (2-3 s per iteration) - successive iterations are much slower (>60 s)

Project details

Verified details

These details have been verified by PyPI
Project links
GitHub Statistics
Maintainers
Avatar for bjhardcastle from gravatar.com bjhardcastle

Unverified details

These details have not been verified by PyPI
Meta
  • License: MIT License (MIT)
  • Author: Ben Hardcastle
  • Requires: Python >=3.9
Classifiers

Release history Release notifications | RSS feed

0.2.89

0.2.88

0.2.87

0.2.86

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This version

0.2.38

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0.2.1

0.1.0

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