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linkapy

A framework to process and analyse multi-modal single-cell data. Linkapy is mainly used to process single-cell methylation data, and is focused on creating an integrated (muData) object of multimodal single-cell data. In this context it means that multiple modalities (e.g. accessibility, DNA methylation, RNA expression) are available from the same cell.

Documentation

Note that this package is still in development and is prone to change without notice. A rudimentary documentation is available.

Quickstart

pip install linkapy
linkapy --help

Project links

Key dates

PyPI data
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  • Released:
Latest release

2 maintainers

PyPI data
Data sourced directly from PyPI's database.
Avatar for FunctionalEpigeneticsLab from gravatar.com FunctionalEpigeneticsLab Avatar for WardDeb from gravatar.com WardDeb

Credits

Author: Ward Deboutte

Requires

Python <3.13, >=3.10

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1.9.0 This release

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