pypi actions codecov downloads clinicedc

META EDC

Metformin treatment in Africa - META

py 3.12+ / DJ 5.2 using the Clinic EDC framework

This codebase is used for two randomized clinical trials:

META PHASE II:

(final version 0.1.77)

Metformin Treatment for Diabetes Prevention in Africa: META Trial TASO, MRC/UVRI/LSHTM, NIMR – TZ and Liverpool School of Tropical Medicine (ISRCTN76157257) http://www.isrctn.com/ISRCTN76157257

META PHASE III:

A randomised placebo-controlled double-blind phase III trial to determine the effects of metformin versus placebo on the incidence of diabetes in HIV-infected persons with pre-diabetes in Tanzania.

Liverpool School of Tropical Medicine

EDCTP grant number: RIA2018CO-2513

Trial registration: ISCRTN 77382043

https://ico.org.uk/ESDWebPages/Entry/Z4763134

See also https://github.com/clinicedc/edc

Made with Django

Installation

As of version 1.1.10, we are building and deploying with uv.

Here we assume you have your DB setup and already have your .env file.

First-time install

Assuming you are logged into the account myaccount:

mkdir -p ~/.etc/meta && \
mkdir ~/edc && \
cd ~/edc && \
uv venv && \
uv pip install -U meta-edc==3.6.1 && \
wget https://raw.githubusercontent.com/meta-trial/meta-edc/3.6.1/manage.py && \
uv pip freeze | grep meta-edc

Copy your .env file to ~/.etc.

Place this at or near the end of your .bashrc:

# >>> EDC using uv >>>
export DJANGO_SETTINGS_MODULE=meta_edc.settings.uat
export META_PHASE=3
export DJANGO_BASE_DIR=/home/myaccount/edc
export DJANGO_ENV_DIR=/home/myaccount/.etc/
cd ~/edc
source .venv/bin/activate
export PATH="/home/myaccount/edc:$PATH"
# <<< EDC using uv <<<

Source .bashrc and run manage.py check.

source ~/.bashrc && \
cd ~/edc && \
python manage.py check

If all is OK, run migrate:

Explicitly specify the settings file when using migrate.

  • live: --settings=meta_edc.settings.live

  • uat: --settings=meta_edc.settings.uat

  • debug: --settings=meta_edc.settings.debug

cd ~/edc && \
python manage.py migrate --settings=meta_edc.settings.live

Update an existing install

From the above example:

cd ~/edc && \
uv venv --clear && \
uv pip install -U meta-edc==3.6.1 && \
wget -O manage.py https://raw.githubusercontent.com/meta-trial/meta-edc/1.1.10/manage.py && \
uv pip freeze | grep meta-edc && \
python manage.py check

If all is OK, run migrate

cd ~/edc && \
python manage.py migrate --settings=meta_edc.settings.live

Key dates

PyPI data
Data sourced directly from PyPI's database.
  • Released:
Newer release available (3.7.2)

2 maintainers

PyPI data
Data sourced directly from PyPI's database.
Avatar for erikvw from gravatar.com erikvw Avatar for JonathanWillitts from gravatar.com JonathanWillitts

Credits

Author: Erik van Widenfelt, Jonathan Willitts

License expression

GPL-3.0-or-later
View SPDX License List

Requires

Python <3.15, >=3.12

Tags

django clinicedc META EDC EDC clinical trials META Trial ISRCTN76157257

Classifiers

Report project as malware

Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

meta_edc-3.6.2.tar.gz (1.6 MB view details)

Uploaded Source

Built Distribution

If you're not sure about the file name format, learn more about wheel file names.

meta_edc-3.6.2-py3-none-any.whl (2.2 MB view details)

Uploaded Python 3

File details

Details for the file meta_edc-3.6.2.tar.gz.

File metadata

  • Download URL: meta_edc-3.6.2.tar.gz
  • Upload date:
  • Size: 1.6 MB
  • Tags: Source
  • Uploaded using Trusted Publishing? No
  • Uploaded via: uv/0.12.1 {"installer":{"name":"uv","version":"0.12.1","subcommand":["publish"]},"python":null,"implementation":{"name":null,"version":null},"distro":{"name":"macOS","version":null,"id":null,"libc":null},"system":{"name":null,"release":null},"cpu":null,"openssl_version":null,"setuptools_version":null,"rustc_version":null,"ci":null}

File hashes

Hashes for meta_edc-3.6.2.tar.gz
Algorithm Hash digest
SHA256 373ee5c6187ce7083a2aa19e4896dcd6399a36266aac50657033c84058b9df45
MD5 1fcf8d56e71b741fdceb0c340ace87e4
BLAKE2b-256 ccf9642f75b6f2ef754ea9dcdc7b6b80864d21b9369a3843db85aca349511d52

See more details on using hashes here.

File details

Details for the file meta_edc-3.6.2-py3-none-any.whl.

File metadata

  • Download URL: meta_edc-3.6.2-py3-none-any.whl
  • Upload date:
  • Size: 2.2 MB
  • Tags: Python 3
  • Uploaded using Trusted Publishing? No
  • Uploaded via: uv/0.12.1 {"installer":{"name":"uv","version":"0.12.1","subcommand":["publish"]},"python":null,"implementation":{"name":null,"version":null},"distro":{"name":"macOS","version":null,"id":null,"libc":null},"system":{"name":null,"release":null},"cpu":null,"openssl_version":null,"setuptools_version":null,"rustc_version":null,"ci":null}

File hashes

Hashes for meta_edc-3.6.2-py3-none-any.whl
Algorithm Hash digest
SHA256 92872fbc195e3d52f90fb6cb961abf5faa28254957b379164919954dd9ce645b
MD5 01970855b8f92306f344844d79bc47d1
BLAKE2b-256 adb42224e380774ae9ec9f9d6b5daa8e8bf065e251a8244a9202316e39fdd5f5

See more details on using hashes here.

Release history Release notifications | RSS feed

3.7.2

3.7.1

3.7.0

3.6.5

3.6.4

3.6.3

This release

3.6.2

3.6.1

3.6.0

3.5.0

3.4.2

3.4.1

3.4.0

3.3.0

3.2.0

3.1.2

3.1.1

3.1.0

3.0.0

2.4.0

2.3.1

2.3.0

2.2.1

2.2.0

2.1.0

2.0.0

1.12.0

1.11.0

1.10.3

1.10.2

1.10.1

1.10.0

1.9.1

1.9.0

1.8.4

1.8.3

1.8.2

1.8.1

1.8.0

1.7.7

1.7.6

1.7.5

1.7.4

1.7.3

1.7.2

1.7.1

1.7.0

1.6.20

1.6.19

1.6.18

1.6.17

1.6.16

1.6.15

1.6.14

1.6.13

1.6.12

1.6.11

1.6.10

1.6.9

1.6.8

1.6.7

1.6.6

1.6.5

1.6.4

1.6.3

1.6.2

1.6.1

1.6.0

1.5.6

1.5.5

1.5.4

1.5.3

1.5.2

1.5.1

1.5.0

1.4.1

1.4.0

1.3.0

1.2.9

1.2.8

1.2.7

1.2.6

1.2.5

1.2.4

1.2.3

1.2.2

1.2.1

1.2.0

1.1.19

1.1.18

1.1.17

1.1.15

1.1.14

1.1.13

1.1.12

1.1.10

1.1.8

1.1.7

1.1.6

1.1.5

1.1.4

1.1.3

1.1.2

1.1.1

1.1.0

1.0.7

1.0.6

1.0.5

1.0.4

1.0.3

1.0.2

1.0.1

1.0.0

0.3.53

0.3.52

0.3.51

0.3.50

0.3.49

0.3.48

0.3.47

0.3.46

0.3.45

0.3.44

0.3.43

0.3.42

0.3.41

0.3.40

0.3.39

0.3.38

0.3.37

0.3.36

0.3.35

0.3.34

0.3.33

0.3.32

0.3.31

0.3.30

0.3.29

0.3.28

0.3.27

0.3.26

0.3.25

0.3.24

0.3.23

0.3.22

0.3.21

0.3.20

0.3.19

0.3.18

0.3.17

0.3.16

0.3.15

0.3.14

0.3.13

0.3.12

0.3.11

0.3.9

0.3.8

0.3.7

0.3.6

0.3.5

0.3.4

0.3.3

0.3.2

0.3.1

0.3.0

0.2.41

0.2.40

0.2.39

0.2.38

0.2.37

0.2.36

0.2.35

0.2.34

0.2.33

0.2.32

0.2.31

0.2.30

0.2.29

0.2.28

0.2.27

0.2.26

0.2.25

0.2.24

0.2.23

0.2.22

0.2.21

0.2.20

0.2.19

0.2.18

0.2.17

0.2.16

0.2.15

0.2.14

0.2.13

0.2.12

0.2.11

0.2.10

0.2.9

0.2.8

0.2.7

0.2.6

0.2.5

0.2.4

0.2.3

0.2.1

0.2.0

0.1.98

0.1.97

0.1.96

0.1.95

0.1.94

0.1.93

0.1.92

0.1.91

0.1.90

0.1.89

0.1.88

0.1.87

0.1.86

0.1.85

0.1.84

0.1.83

0.1.82

0.1.81

0.1.80

0.1.79

0.1.78

0.1.77

0.1.76

0.1.75

0.1.74

0.1.73

0.1.72

0.1.71

0.1.70

0.1.69

0.1.68

0.1.67

0.1.66

0.1.65

0.1.64

0.1.63

0.1.61

0.1.60

0.1.59

0.1.58

0.1.57

0.1.56

0.1.55

0.1.54

0.1.53

0.1.52

0.1.51

0.1.50

0.1.49

0.1.48

0.1.47

0.1.46

0.1.45

0.1.44

0.1.43

0.1.42

0.1.41

0.1.40

0.1.39

0.1.38

0.1.37

0.1.35

0.1.34

0.1.33

0.1.32

0.1.31

0.1.30

0.1.29

0.1.28

0.1.27

0.1.26

0.1.25

0.1.24

0.1.23

0.1.22

0.1.21

0.1.20

0.1.19

0.1.18

0.1.17

0.1.16

0.1.15

0.1.14

0.1.13

0.1.10

0.1.9

0.1.8

0.1.7

0.1.6

0.1.5

0.1.4

0.1.3

0.1.2

0.1.1

0.1.0

Supported by

AWS Cloud computing and Security Sponsor Datadog Monitoring Depot Continuous Integration Fastly CDN Google Download Analytics Pingdom Monitoring Sentry Error logging StatusPage Status page