Visualisation of polyphyletic groups between phylogenetic trees to a reference tree.
Project description
metatree
Visualisation of polyphyletic groups between phylogenetic trees to a given reference tree.
Installation
- PyPI:
pip install metatree - conda:
conda install -c bioconda metatree
Usage
metatree [batchfile] [out_dir] [taxonomy_file] [outgroup] [cpus]
See the example directory for an example on how to use metatree.
Changelog
0.0.1
- Initial release.
Project details
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
metatree-0.0.1.tar.gz
(30.9 kB
view details)
Built Distribution
Filter files by name, interpreter, ABI, and platform.
If you're not sure about the file name format, learn more about wheel file names.
Copy a direct link to the current filters
metatree-0.0.1-py3-none-any.whl
(48.6 kB
view details)
File details
Details for the file metatree-0.0.1.tar.gz.
File metadata
- Download URL: metatree-0.0.1.tar.gz
- Upload date:
- Size: 30.9 kB
- Tags: Source
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/3.2.0 pkginfo/1.5.0.1 requests/2.24.0 setuptools/49.2.0.post20200712 requests-toolbelt/0.9.1 tqdm/4.48.0 CPython/3.8.5
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
97b161f1b03a31fd19cf387ff5012b91fd968225ff32db8e3398e7a683af5549
|
|
| MD5 |
38744157058c0740c9041d36774bcc00
|
|
| BLAKE2b-256 |
559b315fcef231613239fbfb79b9289349800e0af3f11dfe47614d11eeef63c4
|
File details
Details for the file metatree-0.0.1-py3-none-any.whl.
File metadata
- Download URL: metatree-0.0.1-py3-none-any.whl
- Upload date:
- Size: 48.6 kB
- Tags: Python 3
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/3.2.0 pkginfo/1.5.0.1 requests/2.24.0 setuptools/49.2.0.post20200712 requests-toolbelt/0.9.1 tqdm/4.48.0 CPython/3.8.5
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
f822de423b811ac1f93e1277285f2bea3a0cc3eca2a30ddcef96ba5027760fd3
|
|
| MD5 |
cb4c9293a66cec9d52e98b3055fef40e
|
|
| BLAKE2b-256 |
df231e360bddd0b056df9bfb91c2f41e911d21b5a1b54e4059c91cb47740711c
|