Metagenomics Framework

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  • License: GNU General Public License v2 or later (GPLv2+) (GPL2+)
  • Author: Francesco Rubino
  • Tags metagenomics, library, biology, bioinformatics, snps, gff, fasta
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Project description

The aim of this library [1] is to provide a series of useful modules and packages to make it easier to build custom pipelines for metagenomics or any kind of bioinformatics analysis. It integrates other well known python libraries in bioinformatics, like HTSeq, pysam, numpy and scipy.

A pipeline is provided, for variation study of metagenomic samples.

A discussion mailing list is available at mgkit-users.

Project details

Verified details

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Avatar for frubino from gravatar.com frubino

Unverified details

These details have not been verified by PyPI
Project links
Meta
  • License: GNU General Public License v2 or later (GPLv2+) (GPL2+)
  • Author: Francesco Rubino
  • Tags metagenomics, library, biology, bioinformatics, snps, gff, fasta
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0.5.8

0.5.7

0.5.6

0.5.5

0.5.4

0.5.3

0.5.2

0.5.1

0.5.0

0.4.3

0.4.2

0.4.1

0.4.0

0.3.4

0.3.3

0.3.2

0.3.0

0.2.5

0.2.4

0.2.3

0.2.2

0.2.1

0.2.0

0.1.16

0.1.15

0.1.14

0.1.13

0.1.12

This version

0.1.11

0.1.10

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