mgkit

Metagenomics Framework

Project description

The aim of this library [1] is to provide a series of useful modules and packages to make it easier to build custom pipelines for metagenomics or any kind of bioinformatics analysis. It integrates other well known python libraries in bioinformatics, like HTSeq, pysam, numpy and scipy.

A pipeline is provided, for variation study of metagenomic samples.

A discussion mailing list is available at mgkit-users.

Project details

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0.5.8

Oct 27, 2021

0.5.7

Oct 25, 2021

0.5.6

Jan 29, 2021

0.5.5

Nov 19, 2020

0.5.4

Oct 23, 2020

0.5.3

Oct 19, 2020

0.5.2

Sep 18, 2020

0.5.1

Sep 16, 2020

0.5.0

Aug 28, 2020

0.4.3

Apr 20, 2020

0.4.2

Feb 5, 2020

0.4.1

Nov 8, 2019

0.4.0

Sep 9, 2019

0.3.4

May 22, 2018

0.3.3

Apr 23, 2018

0.3.2

Sep 13, 2017

0.3.0

Sep 27, 2016

0.2.5

Apr 14, 2016

0.2.4

Feb 22, 2016

0.2.3

Feb 6, 2016

0.2.2

Jan 8, 2016

0.2.1

Dec 4, 2015

0.2.0

Sep 30, 2015

0.1.16

Apr 3, 2015

0.1.15

Feb 18, 2015

0.1.14

Jan 23, 2015

0.1.13

Sep 25, 2014

0.1.12

Jul 8, 2014

This version

0.1.11

Mar 21, 2014

0.1.10

Mar 3, 2014

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