MetabolomicsHub Common Data Model
Project description
MetabolomicsHub Common Data Model and Utility Tools (mhd-model)
You can find documentation on Github
Development Environment
Development environment for linux or mac
# install python package manager uv
curl -LsSf https://astral.sh/uv/install.sh | sh
# add $HOME/.local/bin to your PATH, either restart your shell or run
export PATH=$HOME/.local/bin:$PATH
# install git from https://git-scm.com/downloads
# Linux command
apt update; apt install git -y
# Mac command
# brew install git
# clone project from github
git clone https://github.com/MetabolomicsHub/mhd_model.git
cd mhd-model
# install python if it is not installed
uv python install 3.12
# install python dependencies
uv sync
# install pre-commit to check repository integrity and format checking
uv run pre-commit
# open your IDE (vscode, pycharm, etc.) and set python interpreter as .venv/bin/python
Commandline Usage
# you can use any python version >= 3.12
pip install mhd-model
mhd-cli
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
mhd_model-0.1.36.tar.gz
(110.1 kB
view details)
Built Distribution
Filter files by name, interpreter, ABI, and platform.
If you're not sure about the file name format, learn more about wheel file names.
Copy a direct link to the current filters
mhd_model-0.1.36-py3-none-any.whl
(143.4 kB
view details)
File details
Details for the file mhd_model-0.1.36.tar.gz.
File metadata
- Download URL: mhd_model-0.1.36.tar.gz
- Upload date:
- Size: 110.1 kB
- Tags: Source
- Uploaded using Trusted Publishing? No
- Uploaded via: uv/0.9.26 {"installer":{"name":"uv","version":"0.9.26","subcommand":["publish"]},"python":null,"implementation":{"name":null,"version":null},"distro":{"name":"Ubuntu","version":"24.04","id":"noble","libc":null},"system":{"name":null,"release":null},"cpu":null,"openssl_version":null,"setuptools_version":null,"rustc_version":null,"ci":true}
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
228119c1edd4512527dd2ca9e309063b8f57feccc22ba959b52dd6f553f3197c
|
|
| MD5 |
b7b6329fe01d7f7ce01d59cd5eb257d7
|
|
| BLAKE2b-256 |
7764cb6a8654239c2ad5fd245038163094e7deae63397e448c51e80257c9d881
|
File details
Details for the file mhd_model-0.1.36-py3-none-any.whl.
File metadata
- Download URL: mhd_model-0.1.36-py3-none-any.whl
- Upload date:
- Size: 143.4 kB
- Tags: Python 3
- Uploaded using Trusted Publishing? No
- Uploaded via: uv/0.9.26 {"installer":{"name":"uv","version":"0.9.26","subcommand":["publish"]},"python":null,"implementation":{"name":null,"version":null},"distro":{"name":"Ubuntu","version":"24.04","id":"noble","libc":null},"system":{"name":null,"release":null},"cpu":null,"openssl_version":null,"setuptools_version":null,"rustc_version":null,"ci":true}
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
e2c670f3ae924775e3bec32d5ee7469040aeb3849b9a665690d02c3f0f78eae9
|
|
| MD5 |
e85641e630b84a95bb612e6b0fa7aaf8
|
|
| BLAKE2b-256 |
8d77803fbdb79d715a37fc6364c1d41ef2c6b452e682f905c8d7337c5a867fb4
|
