A deep learning model for microenvironment estimation based on spatial transcriptomics
Project description
mievformer
mievformer is a Python package for nicheformer analysis, providing tools for spatial transcriptomics data analysis, including niche modeling, cell-cell interaction estimation, and visualization.
Installation
pip install mievformer
Documentation
For detailed usage instructions, tutorials, and API reference, please visit the documentation:
https://kojikoji.github.io/mievformer_package/index.html
License
MIT License
Project details
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