MirCAT-v2

Mirshahi-Lab CT Analysis Toolkit (MirCAT). Convert dicoms, segment niftis, extract data.
V1 has been archived. This version is almost a full rewrite of the segmentation section, specifically to incorporate nnUNet models directly into the pipeline.

NOTES

When using docker -> make sure to add the --ipc=host flag or segmentation will not work

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PyPI data
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Requires

Python >=3.11

Provides Extra

all radiomics seg stats

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1.0.8 This release

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