Installation
pip install molgenis-emx2-staging-migrator
How to use
Within your Python project import the class StagingMigrator and use it as a context manager. Specify the URL of the server, the API token, the name of the target of the published data, i.e. the catalogue. It is recommended that the token not be written directly in your script but stored as an environmental variable and retrieved at runtime.
from molgenis_emx2_staging_migrator import StagingMigrator
token = ...
with StagingMigrator(url='https://example.molgeniscloud.org', token=token,
target="catalogue") as migrator:
# Retrieve sign-in information
print(migrator.status)
# Set the source and target schemas
migrator.set_source('StagingExample')
migrator.set_target('catalogue')
# Execute the migration
migrator.migrate()
Build
(venv) $ python -m build
(venv) $ pip install dist/molgenis_emx2_staging_migrator*.whl
Release files for molgenis-emx2-staging-migrator 13.196.1
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | |
|---|---|---|---|
| molgenis_emx2_staging_migrator-13.196.1.tar.gz | 11.6 kB | Details |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Reset |
|---|---|---|---|---|
| molgenis_emx2_staging_migrator-13.196.1-py3-none-any.whl | Python 3 | none | any | Details |
Total release size: 24.9 kB
Release files / molgenis_emx2_staging_migrator-13.196.1.tar.gz
| Download URL | molgenis_emx2_staging_migrator-13.196.1.tar.gz |
|---|---|
| Size | 11.6 kB |
| Tags | Source |
|
SHA-256 checksum How to use checksums |
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|
|
BLAKE2b-256 checksum How to use checksums |
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|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/7.0.0 CPython/3.12.3
|
Release files / molgenis_emx2_staging_migrator-13.196.1-py3-none-any.whl
| Download URL | molgenis_emx2_staging_migrator-13.196.1-py3-none-any.whl |
|---|---|
| Size | 13.3 kB |
| Tags | Python 3 |
|
SHA-256 checksum How to use checksums |
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|
|
BLAKE2b-256 checksum How to use checksums |
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|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/7.0.0 CPython/3.12.3
|
