napari-brainreg-standard
Visualise brainreg registration output in napari
Based on the napari cookiecutter plugin template and napari-ndtiffs by @tlambert03
Installation
Assuming you already have napari installed, you can install napari-brainreg-standard via pip:
pip install napari-brainreg-standard
Usage
Open napari and drag your brainreg output directory (the one with the log file) onto the napari window.
Various images should then open, including:
Image (downsampled)- the image used for registrationAnnotations- the atlas labels
If you downsampled additional channels, these will also be loaded.
1 maintainer
Metadata
1 maintainer
Release files for napari-brainreg-standard 0.0.3
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | |
|---|---|---|---|
| napari-brainreg_standard-0.0.3.tar.gz | 11.3 MB | Details |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Reset |
|---|---|---|---|---|
| napari_brainreg_standard-0.0.3-py3-none-any.whl | Python 3 | none | any | Details |
Total release size: 11.3 MB
Release files / napari-brainreg_standard-0.0.3.tar.gz
| Download URL | napari-brainreg_standard-0.0.3.tar.gz |
|---|---|
| Size | 11.3 MB |
| Tags | Source |
|
SHA-256 checksum How to use checksums |
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twine/3.2.0 pkginfo/1.5.0.1 requests/2.24.0 setuptools/49.6.0 requests-toolbelt/0.9.1 tqdm/4.48.2 CPython/3.8.5
|
Release files / napari_brainreg_standard-0.0.3-py3-none-any.whl
| Download URL | napari_brainreg_standard-0.0.3-py3-none-any.whl |
|---|---|
| Size | 5.8 kB |
| Tags | Python 3 |
|
SHA-256 checksum How to use checksums |
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BLAKE2b-256 checksum How to use checksums |
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Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/3.2.0 pkginfo/1.5.0.1 requests/2.24.0 setuptools/49.6.0 requests-toolbelt/0.9.1 tqdm/4.48.2 CPython/3.8.5
|
