Skip to main content

A segmentation tool to get conidie and hyphe

Project description


License BSD-3 PyPI Python Version tests codecov napari hub

A segmentation tool to get conidie and hyphe

This napari plugin was generated with Cookiecutter using @napari's cookiecutter-napari-plugin template.

This plugin is a use case for obtaining conidia and hyphae surface from images. This plugin is a private tool dedicated exclusively to the work of the QUASAV team.


This private tool cannot be found in the built-in napari. The installation therefore follows two steps:

1 - Install latest development version :

git clone


Download napari-conidie zip file

2 - Drag and drop napari-conidie file into the built-in


Contributions are very welcome. Tests can be run with tox, please ensure the coverage at least stays the same before you submit a pull request.


Distributed under the terms of the BSD-3 license, "napari-conidie" is free and open source software


If you encounter any problems, please file an issue along with a detailed description.

Project details

Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

napari-conidie-0.0.1.tar.gz (11.2 kB view hashes)

Uploaded source

Built Distribution

napari_conidie-0.0.1-py3-none-any.whl (10.2 kB view hashes)

Uploaded py3

Supported by

AWS AWS Cloud computing and Security Sponsor Datadog Datadog Monitoring Fastly Fastly CDN Google Google Download Analytics Microsoft Microsoft PSF Sponsor Pingdom Pingdom Monitoring Sentry Sentry Error logging StatusPage StatusPage Status page