A napari plugin for filament analysis
Project description
napari-filaments
A napari plugin for filament analysis.
Currently implemented functions
- Fit paths to filaments in an image as a 2-D spline curve.
- Clip paths by fitting using error function.
- Sub-pixel measurement of filament length.
This napari plugin was generated with Cookiecutter using @napari's cookiecutter-napari-plugin template.
Installation
You can install napari-filaments via pip:
pip install napari-filaments
To install latest development version :
pip install git+https://github.com/hanjinliu/napari-filaments.git
Contributing
Contributions are very welcome. Tests can be run with tox, please ensure the coverage at least stays the same before you submit a pull request.
License
Distributed under the terms of the BSD-3 license, "napari-filaments" is free and open source software
Issues
If you encounter any problems, please file an issue along with a detailed description.
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