napari-he-dapi
A napari plugin for H&E ↔ DAPI virtual staining, powered by
he-dapi.
Open an H&E image in napari, launch the widget from Plugins → H&E <-> DAPI, pick the direction, and the predicted virtual stain appears as a new layer.
Install
pip install napari-he-dapi
Use
- Open napari and load an H&E image (
File → Open). Plugins → H&E <-> DAPI Virtual Staining → H&E <-> DAPI.- Choose direction (
he2dapi), click Run virtual staining.
Weights download automatically from
urbiologicalpa/he-dapi-translator.
Status
he2dapi (paired Pix2Pix) available; dapi2he (CycleGAN) when unpaired training completes.
License
MIT. Research demonstration only — not validated for clinical use.
1 maintainer
Metadata
1 maintainer
Release files for napari-he-dapi 0.1.0
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | |
|---|---|---|---|
| napari_he_dapi-0.1.0.tar.gz | 2.3 kB | Details |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Reset |
|---|---|---|---|---|
| napari_he_dapi-0.1.0-py3-none-any.whl | Python 3 | none | any | Details |
Total release size: 5.4 kB
Release files / napari_he_dapi-0.1.0.tar.gz
| Download URL | napari_he_dapi-0.1.0.tar.gz |
|---|---|
| Size | 2.3 kB |
| Tags | Source |
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SHA-256 checksum How to use checksums |
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uv/0.12.7 {"installer":{"name":"uv","version":"0.12.7","subcommand":["publish"]},"python":null,"implementation":{"name":null,"version":null},"distro":{"name":"Ubuntu","version":"26.04","id":"resolute","libc":null},"system":{"name":null,"release":null},"cpu":null,"openssl_version":null,"setuptools_version":null,"rustc_version":null,"ci":null}
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Release files / napari_he_dapi-0.1.0-py3-none-any.whl
| Download URL | napari_he_dapi-0.1.0-py3-none-any.whl |
|---|---|
| Size | 3.1 kB |
| Tags | Python 3 |
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SHA-256 checksum How to use checksums |
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uv/0.12.7 {"installer":{"name":"uv","version":"0.12.7","subcommand":["publish"]},"python":null,"implementation":{"name":null,"version":null},"distro":{"name":"Ubuntu","version":"26.04","id":"resolute","libc":null},"system":{"name":null,"release":null},"cpu":null,"openssl_version":null,"setuptools_version":null,"rustc_version":null,"ci":null}
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