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A napari plugin to analyse local orientation in images

Project description

napari-orientation

License BSD-3 PyPI Python Version tests codecov napari hub npe2 Copier

A napari plugin to analyse local orientation in images.

Installation

You can install the plugin from the napari GUI interface by going to Plugins/Install\Uninstall Plugins and selecting napari-orientation . Alternatively, you can install the plugin from the napari conda environment via pip:

pip install napari-orientation

Usage

You can access all the functionalities of the plugin from the menu Plugins\Orientation Analysis.

All the analyses work only on single-channel 2D images and on single-channel 2D time series. In this last case the analysis can be restricted to single frames.

Contributing

Contributions are very welcome. Tests can be run with tox, please ensure the coverage at least stays the same before you submit a pull request.

License

Distributed under the terms of the BSD-3 license, "napari-orientation" is free and open source software

Issues

If you encounter any problems, please file an issue along with a detailed description.


This napari plugin was generated with copier using the napari-plugin-template (None).

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