Skip to main content

A plugin to send and receive image data for visualization in Napari from other applications

Project description

napari-stream

License MIT PyPI Python Version codecov napari hub npe2 Copier

A plugin to send and receive image data for visualization in Napari from other applications.

napari-stream lets you push images from any application, process, or codebase into a running napari instance—even from another machine. It can automatically pull array-like data (NumPy, PyTorch tensors, zarr arrays, etc.) from nested Python lists and dicts, so you can stream complex structures without manual extraction. You can keep things private (local IPC/loopback) or make the receiver reachable publicly over TCP. The receiver endpoint can also be set via the NAPARI_STREAM_ENDPOINT environment variable.

Quick usage

from napari_stream.sender import StreamSender, send
import numpy as np

# Option 1: explicit sender (recommended when reusing across many sends)
sender = StreamSender(endpoint="tcp://192.0.2.10:5556")  # or leave None to use NAPARI_STREAM_ENDPOINT/default
sender.send(np.random.rand(256, 256), name="image")

# Option 2: convenience function; pass connection kwargs through
send(np.random.rand(64, 64), name="quick", endpoint="tcp://127.0.0.1:5556")

On the receiving side, open the napari dock widget, choose your endpoint, and toggle public access if you want to accept connections from other machines.

Installation

You can install napari-stream via pip:

pip install napari-stream

If napari is not already installed, you can install napari-stream with napari and Qt via:

pip install "napari-stream[all]"

Contributing

Contributions are very welcome. Tests can be run with tox, please ensure the coverage at least stays the same before you submit a pull request.

License

Distributed under the terms of the MIT license, "napari-stream" is free and open source software

Issues

If you encounter any problems, please [file an issue] along with a detailed description.

Acknowledgments

    

This repository is developed and maintained by the Applied Computer Vision Lab (ACVL) of Helmholtz Imaging and the Division of Medical Image Computing at DKFZ.

This repository was generated with copier using the napari-plugin-template.

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

napari_stream-0.0.9.tar.gz (22.9 kB view details)

Uploaded Source

Built Distribution

If you're not sure about the file name format, learn more about wheel file names.

napari_stream-0.0.9-py3-none-any.whl (16.3 kB view details)

Uploaded Python 3

File details

Details for the file napari_stream-0.0.9.tar.gz.

File metadata

  • Download URL: napari_stream-0.0.9.tar.gz
  • Upload date:
  • Size: 22.9 kB
  • Tags: Source
  • Uploaded using Trusted Publishing? Yes
  • Uploaded via: twine/6.1.0 CPython/3.13.7

File hashes

Hashes for napari_stream-0.0.9.tar.gz
Algorithm Hash digest
SHA256 c2f58e64f8862eb0d1af7a2589cef7db6f3d3f7a8ba6e6aacfbfa2991f566513
MD5 7d45e962ba4d19b8e6b5909fe83f0676
BLAKE2b-256 dd1b39e566abff621b232cf4c4cc39bda5d6647b65951f0242c07c8f02362510

See more details on using hashes here.

Provenance

The following attestation bundles were made for napari_stream-0.0.9.tar.gz:

Publisher: test_and_deploy.yml on MIC-DKFZ/napari-stream

Attestations: Values shown here reflect the state when the release was signed and may no longer be current.

File details

Details for the file napari_stream-0.0.9-py3-none-any.whl.

File metadata

  • Download URL: napari_stream-0.0.9-py3-none-any.whl
  • Upload date:
  • Size: 16.3 kB
  • Tags: Python 3
  • Uploaded using Trusted Publishing? Yes
  • Uploaded via: twine/6.1.0 CPython/3.13.7

File hashes

Hashes for napari_stream-0.0.9-py3-none-any.whl
Algorithm Hash digest
SHA256 ad17df224b3b16203bfcaf10bec29c9bc2cf348bb30167fb2609cd5e4229d700
MD5 7c760081240f04d1d63b4be8e43af407
BLAKE2b-256 63c2a759dff4ac142ddc292c1733e3f141d4ff98e48be0f1f4653739cd5a541c

See more details on using hashes here.

Provenance

The following attestation bundles were made for napari_stream-0.0.9-py3-none-any.whl:

Publisher: test_and_deploy.yml on MIC-DKFZ/napari-stream

Attestations: Values shown here reflect the state when the release was signed and may no longer be current.

Supported by

AWS Cloud computing and Security Sponsor Datadog Monitoring Depot Continuous Integration Fastly CDN Google Download Analytics Pingdom Monitoring Sentry Error logging StatusPage Status page