ndx-dandi-icephys extension for NWB:N

Extension of the lab_meta_data field.

Python Installation

pip install ndx-dandi-icephys

Python Usage

from datetime import datetime
from pynwb import NWBFile, NWBHDF5IO
from ndx_dandi_icephys import DandiIcephysMetadata

nwb = NWBFile('session_description', 'identifier', datetime.now().astimezone())

# Creates LabMetaData container
lab_metadata = DandiIcephysMetadata(
    cell_id='cell_id',
    tissue_sample_id='tissue_sample_id',
)

# Add to file
nwb.add_lab_meta_data(lab_metadata)

# Write nwb file
with NWBHDF5IO('test_labmetadata.nwb', 'w') as io:
    io.write(nwb)

# Read nwb file and check its content
with NWBHDF5IO('test_labmetadata.nwb', 'r', load_namespaces=True) as io:
    nwb = io.read()
    print(nwb.lab_meta_data['DandiIcephysMetadata'])

Metadata

Release files for ndx-dandi-icephys 0.4.0

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Source distribution for ndx-dandi-icephys 0.4.0
File	Size	Uploaded	Provenance	Actions
ndx-dandi-icephys-0.4.0.tar.gz	3.0 kB	Jul 30, 2021	Without provenance	Details for ndx-dandi-icephys-0.4.0.tar.gz

Built distribution (wheel)

Table of built distributions (wheels) for ndx-dandi-icephys 0.4.0
File	Interpreter	ABI	Platform	Actions Reset
ndx_dandi_icephys-0.4.0-py3-none-any.whl 5.1 kB Jul 30, 2021 Without provenance	Python 3	none	any	Details for ndx_dandi_icephys-0.4.0-py3-none-any.whl

Total release size: 8.0 kB

Release files / ndx-dandi-icephys-0.4.0.tar.gz

Download URL	ndx-dandi-icephys-0.4.0.tar.gz
Size	3.0 kB
Tags	Source
SHA-256 checksum How to use checksums	`fc667f2b8f8cb2b7448ffb74d810f3508b31c135023117327f80e6d3dbd2544e`
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Upload date	Jul 30, 2021
Uploaded using Trusted Publishing? What is trusted publishing?	No
Uploaded via	`twine/3.4.2 importlib_metadata/4.6.1 pkginfo/1.5.0.1 requests/2.25.1 requests-toolbelt/0.9.1 tqdm/4.46.0 CPython/3.7.3`

Release files / ndx_dandi_icephys-0.4.0-py3-none-any.whl

Download URL	ndx_dandi_icephys-0.4.0-py3-none-any.whl
Size	5.1 kB
Tags	Python 3
SHA-256 checksum How to use checksums	`55e8a03d2715242701be280186ae9c3e085f275143fdb56a4a6e92020eaeb690`
BLAKE2b-256 checksum How to use checksums	`aad805e3fefca88dc47895fe662ed17bd1a3566a6898778cded19a305823c04a`
Upload date	Jul 30, 2021
Uploaded using Trusted Publishing? What is trusted publishing?	No
Uploaded via	`twine/3.4.2 importlib_metadata/4.6.1 pkginfo/1.5.0.1 requests/2.25.1 requests-toolbelt/0.9.1 tqdm/4.46.0 CPython/3.7.3`

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0.4.0 This release

Jul 30, 2021 2 release files No provenance

ndx-dandi-icephys 0.4.0