nima 0.5.4

Numerical IMage Analyses.

A library and a cli to help image analyses based on scipy.ndimage and scikit-image.

Features

• easy dark and flat correction
• automatic cell segmentation
• easy ratio analyses

Installation

:

pyenv virtualenv 3.6.13 nima-0.3.1-py36
poetry install
pip install .

Optionally:

python -m ipykernel install \--user \--name=\"nima0.3.1\"

Usage

To use nima in a project:

from nima import nima

See documentation for the nima command line.

Description

A longer description of your project goes here...

Note

poetry rocks? development my idea is to use global flake8 and black and no need to track linting and safety in poetry. KISS.

pyenv activate nima-... poetry install pre-commit install before next first commit: pre-commit run --all-files

pyenv activare nima-0.2 poetry install pip install . so it is not installed in development mode and this version will persist to updates.

todo

• restore sane complexity value (< 21).