ontobio - a python API for working with ontologies and associations
This module provides objects and utility methods for working with ontologies and associations of entities (genes, variants, etc) to ontology classes.
The ontologies and associations can either be local files or provided by remote services (currently the OntoBee SPARQL service for ontologies and a Monarch or GO Golr service for associations).
Documentation
Documentation is on readthedocs
Notebooks
See the Jupyter Notebooks for code examples
Mailing list
Release files for ontobio 2.9.12
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | Provenance | |
|---|---|---|---|---|
| ontobio-2.9.12.tar.gz | 263.5 kB | Without provenance | Details |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Reset |
|---|---|---|---|---|
| ontobio-2.9.12-py3-none-any.whl | Python 3 | none | any | Details |
Total release size: 582.6 kB
Release files / ontobio-2.9.12.tar.gz
| Download URL | ontobio-2.9.12.tar.gz |
|---|---|
| Size | 263.5 kB |
| Tags | Source |
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SHA-256 checksum How to use checksums |
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BLAKE2b-256 checksum How to use checksums |
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| Upload date | |
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No |
| Uploaded via |
twine/5.1.1 CPython/3.10.3
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Release files / ontobio-2.9.12-py3-none-any.whl
| Download URL | ontobio-2.9.12-py3-none-any.whl |
|---|---|
| Size | 319.1 kB |
| Tags | Python 3 |
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SHA-256 checksum How to use checksums |
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BLAKE2b-256 checksum How to use checksums |
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| Upload date | |
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Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/5.1.1 CPython/3.10.3
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