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Library for working with OBO Library Ontologies and associations

Project Description

ontobio - a python API for working with ontologies and associations

This module provides objects and utility methods for working with ontologies and associations of entities (genes, variants, etc) to ontology classes.

The ontologies and associations can either be local files or provided by remote services (currently the OntoBee SPARQL service for ontologies and a Monarch or GO Golr service for associations).

Documentation

Documentation is on readthedocs

Notebooks

See the Jupyter Notebooks for code examples

Release History

Release History

This version
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0.2.25

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0.2.24

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0.2.23

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0.2.22

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0.2.21

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0.2.20

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0.2.19

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0.2.18

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0.2.17

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0.2.16

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0.2.15

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0.2.14

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0.2.13

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0.2.12

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0.2.11

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0.2.10

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0.2.9

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0.2.8

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0.2.7

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0.2.6

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0.2.5

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0.2.4

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0.2.3

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0.2.2

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0.2.1

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0.1.6

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0.1.5

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0.1.4

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0.1.3

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0.1.2

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0.1.1

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File Name & Checksum SHA256 Checksum Help Version File Type Upload Date
ontobio-0.2.25-py3.6.egg (132.1 kB) Copy SHA256 Checksum SHA256 3.6 Egg Dec 4, 2017
ontobio-0.2.25-py3-none-any.whl (136.7 kB) Copy SHA256 Checksum SHA256 py3 Wheel Dec 4, 2017
ontobio-0.2.25.tar.gz (99.6 kB) Copy SHA256 Checksum SHA256 Source Dec 4, 2017

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