ontobio

Library for working with OBO Library Ontologies and associations

Project description

ontobio - a python API for working with ontologies and associations

This module provides objects and utility methods for working with ontologies and associations of entities (genes, variants, etc) to ontology classes.

The ontologies and associations can either be local files or provided by remote services (currently the OntoBee SPARQL service for ontologies and a Monarch or GO Golr service for associations).

Documentation

Documentation is on readthedocs

Notebooks

See the Jupyter Notebooks for code examples

Mailing list

biolink-api google group

Project details

Release history Release notifications

This version

1.6.3

Nov 7, 2018

1.6.2

Oct 31, 2018

1.6.1

Oct 30, 2018

1.6.0

Oct 25, 2018

1.5.2

Oct 16, 2018

1.5.1

Oct 16, 2018

1.5.0

Oct 9, 2018

1.4.7

Sep 26, 2018

1.4.6

Sep 24, 2018

1.4.5

Sep 19, 2018

1.4.4

Sep 19, 2018

1.4.3

Sep 12, 2018

1.4.2

Sep 12, 2018

1.4.1

Sep 12, 2018

1.4.0

Sep 6, 2018

1.3.1

Sep 1, 2018

1.3.0

Aug 29, 2018

1.2.4

Jul 27, 2018

1.2.3

Jul 24, 2018

1.1.4

Jun 28, 2018

1.1.3

Jun 12, 2018

1.1.2

Jun 1, 2018

1.1.1

May 31, 2018

1.1.0

May 26, 2018

1.0.4

May 16, 2018

1.0.3

May 12, 2018

1.0.2

May 9, 2018

1.0.1

May 8, 2018

1.0.0

May 7, 2018

0.2.37

Apr 26, 2018

0.2.36

Mar 27, 2018

0.2.35

Mar 27, 2018

0.2.34

Mar 22, 2018

0.2.33

Mar 14, 2018

0.2.32

Mar 9, 2018

0.2.31

Feb 26, 2018

0.2.30

Feb 20, 2018

0.2.29

Feb 6, 2018

0.2.28

Jan 31, 2018

0.2.27

Jan 22, 2018

0.2.26

Dec 19, 2017

0.2.25

Dec 4, 2017

0.2.24

Nov 15, 2017

0.2.23

Nov 10, 2017

0.2.22

Nov 2, 2017

0.2.21

Nov 2, 2017

0.2.20

Oct 19, 2017

0.2.19

Sep 11, 2017

0.2.18

Sep 7, 2017

0.2.17

Sep 2, 2017

0.2.16

Aug 21, 2017

0.2.15

Aug 9, 2017

0.2.14

Jul 21, 2017

0.2.13

Jul 15, 2017

0.2.12

Jul 13, 2017

0.2.11

Jul 5, 2017

0.2.10

Jun 28, 2017

0.2.9

Jun 27, 2017

0.2.8

Jun 27, 2017

0.2.7

Jun 22, 2017

0.2.6

Jun 21, 2017

0.2.5

Jun 20, 2017

0.2.4

Jun 10, 2017

0.2.3

May 31, 2017

0.2.2

May 24, 2017

0.2.1

May 17, 2017

0.1.6

May 2, 2017

0.1.5

May 2, 2017

0.1.4

Apr 28, 2017

0.1.3

Apr 24, 2017

0.1.2

Apr 18, 2017

0.1.1

Apr 18, 2017

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Filename, size & hash SHA256 hash help	File type	Python version	Upload date
ontobio-1.6.3-py3.7.egg (193.9 kB) Copy SHA256 hash SHA256	Egg	3.7	Nov 7, 2018
ontobio-1.6.3-py3-none-any.whl (199.3 kB) Copy SHA256 hash SHA256	Wheel	py3	Nov 7, 2018
ontobio-1.6.3.tar.gz (148.7 kB) Copy SHA256 hash SHA256	Source	None	Nov 7, 2018