ontobench
This repo has code for creating benchmarks for ontology changes.
For each pull request:
- fetch metadata from github
- find linked issue(s)
- fetch the commit IDs of the "before" and "after" states
- create a diff/patch from the two IDs
All of this information will be stored in a pydantic data model, and exported to JSON
Note that commits are typically simple changes in the *-edit.obo file, but may involve other files
See workdir/ for some example repos that are checked out.
Examples
go-ontology
- 13117 - multiple stanzas
4 maintainers
Metadata
4 maintainers
Release files for ontoeval 0.1.0
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | |
|---|---|---|---|
| ontoeval-0.1.0.tar.gz | 4.3 MB | Details |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Reset |
|---|---|---|---|---|
| ontoeval-0.1.0-py3-none-any.whl | Python 3 | none | any | Details |
Total release size: 4.4 MB
Release files / ontoeval-0.1.0.tar.gz
| Download URL | ontoeval-0.1.0.tar.gz |
|---|---|
| Size | 4.3 MB |
| Tags | Source |
|
SHA-256 checksum How to use checksums |
e4e95d372fd20cb9eb1df87a9a06d1504a709eb001e6f5d7bfb4c6be63055c92
|
|
BLAKE2b-256 checksum How to use checksums |
cdd7b05f11128bc7f9cbda5bfc5c9769638501a1273ef4546de75dc94e53a529
|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
Yes |
| Uploaded via |
twine/6.1.0 CPython/3.12.9
|
Provenance
Provenance describes where a file came from. On PyPI, provenance is shared via attestations, which provide a verifiable record of the build or publishing details. View details, limitations and caveats.
PyPI Publish Attestation
PyPI verified that this artifact, at this checksum, originated from the publisher listed below.
Signed by GitHub Actions, verified by PyPI on Jul 8, 2025.
Transparency logRelease files / ontoeval-0.1.0-py3-none-any.whl
| Download URL | ontoeval-0.1.0-py3-none-any.whl |
|---|---|
| Size | 61.9 kB |
| Tags | Python 3 |
|
SHA-256 checksum How to use checksums |
aeb4dc55550dbbaccbbf74a421df09cc526ee48e9c94301637ce4ed8009dd664
|
|
BLAKE2b-256 checksum How to use checksums |
7d883e23d39698354249be59c620429223f3baf59521bf14a6b2ea15965fd031
|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
Yes |
| Uploaded via |
twine/6.1.0 CPython/3.12.9
|
Provenance
Provenance describes where a file came from. On PyPI, provenance is shared via attestations, which provide a verifiable record of the build or publishing details. View details, limitations and caveats.
PyPI Publish Attestation
PyPI verified that this artifact, at this checksum, originated from the publisher listed below.
Signed by GitHub Actions, verified by PyPI on Jul 8, 2025.
Transparency log
