phenoradar
Overview
PhenoRadar is a CLI tool for binary phenotype prediction from orthogroup-level TPM.
Prepare input data in the separate phenoradar_prep repository, then supply the
metadata and expression TSVs to PhenoRadar.
Install
pip install phenoradar
Fastest Run
Install the bundled compact test data, materialize default config, then run:
phenoradar dataset
phenoradar config
phenoradar run -c config.yml
Documentation (Recommended Order)
- docs/quickstart.md: first successful run, full run, and prediction.
- docs/data-format.md: required metadata/expression TSV schema.
- docs/configuration.md: config behavior, defaults, and key-by-key definitions.
- docs/cli-reference.md: all commands and options.
- docs/output-artifacts.md: output files, column-level details, and interpretation guidance.
- docs/pipeline-details.md: internal execution behavior.
1 maintainer
Metadata
1 maintainer
Release files for phenoradar 0.5.0
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Source distribution (sdist)
| File | Size | Uploaded | |
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| phenoradar-0.5.0.tar.gz | 467.3 kB | Details |
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| File | Interpreter | ABI | Platform | Reset |
|---|---|---|---|---|
| phenoradar-0.5.0-py3-none-any.whl | Python 3 | none | any | Details |
Total release size: 680.1 kB
Release files / phenoradar-0.5.0.tar.gz
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| Tags | Python 3 |
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