A tool and library for quality control and validation of GA4GH Phenopackets.
Project description
phenosentry
A Python package for ensuring data quality in phenopackets and collections of phenopackets.
Features
- Validate phenopacket with quality checks
Installation
Install with Poetry:
poetry add phenosentry
or with pip:
pip install phenosentry
Usage
Phenosentry can be used as a library.
See example.py for an example usage.
Development
Run tests with:
poetry run pytest
Format the code with:
poetry run ruff format
Run linting with:
poetry run ruff check phenosentry
License
MIT License
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