PICSL Image Graph Cut Tool
This project provides a CLI tool and a Python interface for taking a binary 3D volume (e.g., in NIFTI format or any other readable by ITK) and splitting it into components based on connectivity. The code is a wrapper around the METIS library.
Quick Start (Python)
Install the package:
pip install picsl_image_graph_cut
Download a binary image to experiment with
DATAURL=https://github.com/pyushkevich/greedy/raw/master/testing/data
curl -L $DATAURL/phantom01_mask.nii.gz -o phantom01_mask.nii.gz
Partition the image
from picsl_image_graph_cut import image_graph_cut
help(image_graph_cut)
image_graph_cut('phantom01_mask.nii.gz', 'phantom01_gcut.nii.gz', 5)
1 maintainer
Metadata
1 maintainer
Release files for picsl-image-graph-cut 0.0.1
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Built distributions (wheels)
Total release size: 146.5 MB
Release files / picsl_image_graph_cut-0.0.1-pp310-pypy310_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl
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| Size | 6.3 MB |
| Tags | Linux glibc 2.17+ x86-64 PyPy 3.10 PyPy 3.10 7.3 |
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