PK-DB Python client

Prepare, validate, query, and upload pharmacokinetic studies with the same scientific validation engine used by the PK-DB server. Python 3.14 is supported on Linux, macOS, and Windows.

Install a published release with pip install pkdb, or install this checkout with pip install ./python from the repository root.

Existing pkdb_data study folders work directly:

pkdb prepare studies/ExampleStudy
pkdb validate studies/ExampleStudy --offline
pkdb upload studies/ExampleStudy --endpoint https://pk-db.com

Preparation and validation work offline using the bundled vocabulary. Upload validates locally first and then the server validates the original files again. Set PKDB_API_KEY for authenticated operations and optionally PKDB_ENDPOINT for the default endpoint.

from pkdb import prepare

prepared = prepare("studies/ExampleStudy")
print(prepared.study.sid)

See the client documentation for vocabulary snapshots, structured reports, authentication, queries, and downloads. The source repository contains the separate pkdb-server distribution, which depends on the exact matching public client release.