plantiSMASH - Plant Specialized Metabolite Analysis Shell
plantiSMASH is a specialized extension of antiSMASH for the identification and analysis of biosynthetic gene clusters (BGCs) in plant genomes. It supports advanced plant-specific detection rules and features for comparative genomics, visualization, and more.
📚 Documentation & Wiki
- 🔍 User documentation: plantismash.github.io/documentation
- 🔧 Installation manual: available in the documentation
- 🧠 Developer & technical wiki: GitHub Wiki
📄 Publications & Citation
If you use plantiSMASH in your work, please cite the relevant antiSMASH and plantiSMASH publications:
- How to cite the antiSMASH suite of tools: antiSMASH citations page
- PlantiSMASH publications:
plantiSMASH: automated identification, annotation and expression analysis of plant biosynthetic gene clusters.
Satria A. Kautsar, Hernando G Suarez Duran, Kai Blin, Anne Osbourn & Marnix H. Medema
Nucleic Acids Research, 45(W1), W55-W63. (2017) https://doi.org/10.1093/nar/gkx305
🔓 License
plantiSMASH is open source software, distributed under the GNU Affero General Public License version 3.0 or later. See the LICENSE.txt file for full terms.
🤝 Contributing
Interested in contributing or reporting bugs? See our contributing guidelines or open an issue on the GitHub Issues page.
✉️ Contact
For questions, suggestions, or collaborations, feel free to contact the maintainers via GitHub or reach out to the plantiSMASH team.
Acknowledgements
Some icons used courtesy of fontawesome.com
1 maintainer
Metadata
1 maintainer
Release files for plantismash 2.0.4
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | Provenance | Actions |
|---|---|---|---|---|
| plantismash-2.0.4.tar.gz | 19.7 MB | With provenance | Details for plantismash-2.0.4.tar.gz |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Actions Reset |
|---|---|---|---|---|
| plantismash-2.0.4-py3-none-any.whl | Python 3 | none | any | Details for plantismash-2.0.4-py3-none-any.whl |
Total release size: 40.2 MB
Release files / plantismash-2.0.4.tar.gz
| Download URL | plantismash-2.0.4.tar.gz |
|---|---|
| Size | 19.7 MB |
| Tags | Source |
|
SHA-256 checksum How to use checksums |
e49eb0ed859d7054ee424f81074644beb303fd4fb3624c50fc5d4d528b301145
|
|
BLAKE2b-256 checksum How to use checksums |
fc2a586830682ac9204a6e9be7c3b55eb2e5e527a973823c196dc3254bbacb6c
|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
Yes |
| Uploaded via |
twine/6.1.0 CPython/3.13.7
|
Provenance
Provenance describes where a file came from. On PyPI, provenance is shared via attestations, which provide a verifiable record of the build or publishing details. View details, limitations and caveats.
PyPI Publish Attestation
PyPI verified that this artifact, at this checksum, originated from the publisher listed below.
Signed by GitHub Actions, verified by PyPI on Oct 25, 2025.
Transparency logRelease files / plantismash-2.0.4-py3-none-any.whl
| Download URL | plantismash-2.0.4-py3-none-any.whl |
|---|---|
| Size | 20.5 MB |
| Tags | Python 3 |
|
SHA-256 checksum How to use checksums |
b6895db310a07f86c35b6be8e25cdce3eb464249310662dc211b391d36b097d2
|
|
BLAKE2b-256 checksum How to use checksums |
3c8f4b1d3fe97ade54ba6b4a1bbf6afdffbf047b656144dc14550ad03bf60be2
|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
Yes |
| Uploaded via |
twine/6.1.0 CPython/3.13.7
|
Provenance
Provenance describes where a file came from. On PyPI, provenance is shared via attestations, which provide a verifiable record of the build or publishing details. View details, limitations and caveats.
PyPI Publish Attestation
PyPI verified that this artifact, at this checksum, originated from the publisher listed below.
Signed by GitHub Actions, verified by PyPI on Oct 25, 2025.
Transparency logSecurity for plantismash 2.0.4
Provenance
Provenance describes where a file came from. On PyPI, provenance is shared via attestations, which provide a verifiable record of the build or publishing details. View details, limitations and caveats.
Full provenance
Both files in this release have been uploaded with provenance metadata.
Attestation for plantismash-2.0.4.tar.gz
PyPI Publish Attestation
PyPI verified that this artifact, at this checksum, originated from the publisher listed below.
Signed by GitHub Actions, verified by PyPI on Oct 25, 2025.
Transparency logA note on package security
PyPI is a repository for distributing packages, not a service for auditing them. While third-party security researchers and our staff do their best to detect and remove malicious packages, PyPI cannot guarantee the quality, security or suitability of any given package.
To learn more about protecting yourself from malicious actors, visit our package security documentation.
