plantismash 2.0.4

Detection of plant specialized metabolism gene clusters in plants

plantiSMASH - Plant Specialized Metabolite Analysis Shell

plantiSMASH is a specialized extension of antiSMASH for the identification and analysis of biosynthetic gene clusters (BGCs) in plant genomes. It supports advanced plant-specific detection rules and features for comparative genomics, visualization, and more.

📚 Documentation & Wiki

• 🔍 User documentation: plantismash.github.io/documentation
• 🔧 Installation manual: available in the documentation
• 🧠 Developer & technical wiki: GitHub Wiki

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📄 Publications & Citation

If you use plantiSMASH in your work, please cite the relevant antiSMASH and plantiSMASH publications:

• How to cite the antiSMASH suite of tools: antiSMASH citations page
• PlantiSMASH publications:

plantiSMASH: automated identification, annotation and expression analysis of plant biosynthetic gene clusters.
Satria A. Kautsar, Hernando G Suarez Duran, Kai Blin, Anne Osbourn & Marnix H. Medema Nucleic Acids Research, 45(W1), W55-W63. (2017) https://doi.org/10.1093/nar/gkx305

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🔓 License

plantiSMASH is open source software, distributed under the GNU Affero General Public License version 3.0 or later. See the LICENSE.txt file for full terms.

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🤝 Contributing

Interested in contributing or reporting bugs? See our contributing guidelines or open an issue on the GitHub Issues page.

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✉️ Contact

For questions, suggestions, or collaborations, feel free to contact the maintainers via GitHub or reach out to the plantiSMASH team.

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Acknowledgements

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